RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ADGRE4PQ86SQ3 457 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 SLC16A11Q8NCK7 471 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 FNDC9Q8TBE3 224 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 MAGT1Q9H0U3 335 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 ZBP1Q9H171 429 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 SDF2L1Q9HCN8 221 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 RXFP3Q9NSD7 469 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 FBXO34Q9NWN3 711 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 PHF3Q92576 2039 aaKnown RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 LAMA2P24043 3122 aaKnown RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 H3BNC9 293 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 NXPH3O95157 252 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 CDS2O95674 445 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 TIMP1P01033 207 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 ATP1B2P14415 290 aaPredicted RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 CLDN18P56856 261 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 TAS2R31P59538 309 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 RNF44Q7L0R7 432 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 DPY19L4Q7Z388 723 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 TMEM86AQ8N2M4 240 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 OR52L2PQ8NGH6 319 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 PTPMT1Q8WUK0 201 aaPredicted RBP8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 IMMP2LQ96T52 175 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 AHSPQ9NZD4 102 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 FBXL7Q9UJT9 491 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 SERTAD3Q9UJW9 196 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 MED31Q9Y3C7 131 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 YIPF1Q9Y548 306 aa8.47□□□□□ -1.05
PTCHD4-201ENST00000339488 DOCK11Q5JSL3 2073 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 H7BYZ3 331 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 ZNF217O75362 1048 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 MPC1LP0DKB6 136 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 PSMB5P28074 263 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 BSGP35613 385 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 RANP62826 216 aaKnown RBP8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 DMWDQ09019 674 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 LCN15Q6UWW0 184 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 TMEM217Q8N7C4 229 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 OR52R1Q8NGF1 315 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 OR51G1Q8NGK1 321 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 OR13G1Q8NGZ3 307 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 RPS4Y2Q8TD47 263 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 UBE2E3Q969T4 207 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 WDR76Q9H967 626 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 PILRBQ9UKJ0 227 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 SLC45A2Q9UMX9 530 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 WIPI2Q9Y4P8 454 aa8.46□□□□□ -1.05
PTCHD4-201ENST00000339488 A0A1B0GW64 132 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 A0A1W2PR80 420 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 GAGE12BA1L429 117 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 IGLON5A6NGN9 336 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 LRRC3CA6NJW4 275 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 CORTO00230 105 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC16A5O15375 505 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 WDR1O75083 606 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 EFEMP2O95967 443 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 IGLC2P0DOY2 106 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 GLB1P16278 677 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 MC5RP33032 325 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 LINC00310P59036 64 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 CDK3Q00526 305 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 CDKN3Q16667 212 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM41BQ5BJD5 291 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF684Q5T5D7 378 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 TSPO2Q5TGU0 170 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 RNF144BQ7Z419 303 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 SUMF1Q8NBK3 374 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM186Q96B77 213 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 FGGYQ96C11 551 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 STARD4Q96DR4 205 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC25A44Q96H78 314 aaPredicted RBP8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC46A1Q96NT5 459 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 SPACA5Q96QH8 159 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.06
PTCHD4-201ENST00000339488 MAP1LC3B2A6NCE7 125 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 FAM24AA6NFZ4 105 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 CATP04040 527 aaKnown RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC6A6P31641 620 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 CRYBA4P53673 196 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 TAF10Q12962 218 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 FHL1Q13642 323 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 RUNX2Q13950 521 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 ELAVL3Q14576 367 aaKnown RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 GNMTQ14749 295 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 SHBQ15464 509 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 MRPL2Q5T653 305 aaKnown RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM225Q6GV28 225 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 NIT1Q86X76 327 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF440Q8IYI8 595 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC35A4Q96G79 324 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 MAP1LC3BQ9GZQ8 125 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 PARLQ9H300 379 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 CHODLQ9H9P2 273 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms