RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZNF826PQ6ZT77 177 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CENPSQ8N2Z9 138 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GPX8Q8TED1 209 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CHPT1Q8WUD6 406 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C11orf54Q9H0W9 315 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 H7C417 338 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 AKR7A2O43488 359 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RBBP9O75884 186 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MELTFP08582 738 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GSTP1P09211 210 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 LOXP28300 417 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SERPINF1P36955 418 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CD200P41217 278 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TRIM16LQ309B1 348 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SPRNQ5BIV9 151 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NKAPLQ5M9Q1 402 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PECRQ9BY49 303 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MTFP1Q9UDX5 166 aa12.5□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SULT1C2O00338 296 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MFNGO00587 321 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SSX4O60224 188 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FCER2P06734 321 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GMFBP60983 142 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 OXA1LQ15070 435 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 DCDC5Q6ZRR9 648 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C6orf201Q7Z4U5 140 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM58AQ8N1B3 248 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 LILRB1Q8NHL6 650 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 EMG1Q92979 244 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TLNRD1Q9H1K6 362 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SCPEP1Q9HB40 452 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-201ENST00000338399 LYRM1O43325 122 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 IGHV1-46P01743 117 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 LPLP06858 475 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PGA5P0DJD9 388 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 KLF9Q13886 244 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 DAZAP2Q15038 168 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GDPD3Q7L5L3 318 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MEGF10Q96KG7 1140 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 hCG_1807616A0A1W2PRN6 198 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 OR7C1O76099 320 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PTTG1O95997 202 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SPNP16150 400 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CHATP28329 748 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 DUSP1P28562 367 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RBMXP38159 391 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RFX2P48378 723 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GNG2P59768 71 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PCGF3Q3KNV8 242 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NHLRC3Q5JS37 347 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 BRICD5Q6PL45 260 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NRARPQ7Z6K4 114 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TRAPPC6BQ86SZ2 158 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 Q8IYB0 196 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NEDD4LQ96PU5 975 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C1orf123Q9NWV4 160 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ZDHHC8Q9ULC8 765 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CACNG2Q9Y698 323 aa12.48□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CACNA1DQ01668 2161 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ANKRD20A5PA0PJZ0 165 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SSX5O60225 188 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PFDN1O60925 122 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NXPH2O95156 264 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PTBP3O95758 552 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ECDO95905 644 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GSTT2BP0CG30 244 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TNFAIP6P98066 277 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 HOXA4Q00056 320 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ARFRP1Q13795 201 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PNLIPRP3Q17RR3 467 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ZNF672Q499Z4 452 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ATAD3CQ5T2N8 411 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ZCCHC24Q8N2G6 241 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 POC1AQ8NBT0 407 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ST8SIA4Q92187 359 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAAP24Q9BTP7 215 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 HSF4Q9ULV5 492 aa12.47□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A10PA6NDY2 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A18PA6NE21 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A16PA6NEW6 464 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms