RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
COL2A1-201ENST00000337299 CALHM2Q9HA72 323 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 MPDZO75970 2070 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 GPR179Q6PRD1 2367 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 ARID2Q68CP9 1835 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 MSR1P21757 451 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 EWSR1Q01844 656 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL2A1-201ENST00000337299 CD226Q15762 336 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 PRICKLE4Q2TBC4 344 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 MRPL21Q7Z2W9 205 aaKnown RBP11.74□□□□□ -0.53
COL2A1-201ENST00000337299 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 PRSS50Q9UI38 385 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 SRPK3Q9UPE1 567 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 PPP1R3CQ9UQK1 317 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 SERPINE3A8MV23 424 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 IL33O95760 270 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 P2RY1P47900 373 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
COL2A1-201ENST00000337299 PSG6Q00889 435 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 SFTPA1Q8IWL2 248 aa11.74□□□□□ -0.53
COL2A1-201ENST00000337299 A0A1W2PPV9 198 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 KIAA1324LA8MWY0 1029 aaPredicted RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 RND3P61587 244 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 FAM3AP98173 230 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 LANCL3Q6ZV70 420 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 SLC37A2Q8TED4 501 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 RDH5Q92781 318 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 ADAT3Q96EY9 351 aaPredicted RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 SLC46A1Q96NT5 459 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 FAM117AQ9C073 453 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 SLC2A8Q9NY64 477 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 THAP10Q9P2Z0 257 aaPredicted RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 OTOL1A6NHN0 477 aaPredicted RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 OR3A1P47881 315 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 FBXL14Q8N1E6 418 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 TAAR9Q96RI9 348 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 ST3GAL6Q9Y274 331 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 ARL2-SNX15V9GYD0 113 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 TRAPPC2LH3BP13 241 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 HS3ST1O14792 307 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF737O75373 536 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 CEACAM5P06731 702 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 PGA3P0DJD8 388 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF100Q8IYN0 542 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 OPN3Q9H1Y3 402 aaPredicted RBP11.73□□□□□ -0.53
COL2A1-201ENST00000337299 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 MYOTQ9UBF9 498 aa11.73□□□□□ -0.53
COL2A1-201ENST00000337299 TRBV5-5A0A0J9YX44 114 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 LRP5LA4QPB2 252 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 C4orf51C9J302 202 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 F6UZH7 168 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 TP53I11O14683 189 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 PLRG1O43660 514 aaKnown RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 FCARP24071 287 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 PLP2Q04941 152 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 SMIM15Q7Z3B0 74 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 TMEM9BQ9NQ34 198 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 KCNIP1Q9NZI2 227 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 CLCF1Q9UBD9 225 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 TLCD2A6NGC4 264 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 IL2RGP31785 369 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 ACAA2P42765 397 aaKnown RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 AMTP48728 403 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 GPR132Q9UNW8 380 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 SIPA1L1O43166 1804 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 CASP8AP2Q9UKL3 1982 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 SNRNP200O75643 2136 aaKnown RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 H0YIZ8 118 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 TNFRSF10CO14798 259 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 ZIC2O95409 532 aaPredicted RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 SMAD4Q13485 552 aaKnown RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF260Q3ZCT1 412 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
COL2A1-201ENST00000337299 TMEM52Q8NDY8 209 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 PCGF1Q9BSM1 259 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 ZNF665Q9H7R5 613 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 IL13RA2Q14627 380 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 ZIC1Q15915 447 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 BIVMQ86UB2 503 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 HOGA1Q86XE5 327 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 OR13G1Q8NGZ3 307 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 LIPHQ8WWY8 451 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 TRAPPC2LQ9UL33 140 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
COL2A1-201ENST00000337299 SPINK2P20155 84 aa11.71□□□□□ -0.53
COL2A1-201ENST00000337299 ZXDAP98168 799 aa11.71□□□□□ -0.53
COL2A1-201ENST00000337299 TMED3Q9Y3Q3 217 aa11.71□□□□□ -0.53
COL2A1-201ENST00000337299 A0A1B0GTQ1 180 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms