RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 RBM14Q96PK6 669 aaKnown RBP11.67□□□□□ -0.54
HLCS-201ENST00000336648 SH2D2AQ9NP31 389 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 OR6C3Q9NZP0 311 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
HLCS-201ENST00000336648 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 KCNE1BA0A087WTH5 132 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 HMGA2P52926 109 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 ERVS71-1P61550 626 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 HLA-DRB3P79483 266 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 NCMAPQ5T1S8 102 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 CST9Q5W186 159 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 HSD17B13Q7Z5P4 300 aaPredicted RBP11.67□□□□□ -0.54
HLCS-201ENST00000336648 FAM131CQ96AQ9 280 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 ZNF764Q96H86 408 aaPredicted RBP11.67□□□□□ -0.54
HLCS-201ENST00000336648 ALKBH3Q96Q83 286 aaPredicted RBP11.67□□□□□ -0.54
HLCS-201ENST00000336648 NAT8Q9UHE5 227 aa11.67□□□□□ -0.54
HLCS-201ENST00000336648 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 IGHA1P01876 353 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 IGHA2P01877 340 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 SBK3P0C264 359 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 OPRK1P41145 380 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
HLCS-201ENST00000336648 C20orf196Q8IYI0 205 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 CCL4L1Q8NHW4 92 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 ZNF385DQ9H6B1 395 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 AMMECR1LQ6DCA0 310 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 TGIF2LXQ8IUE1 241 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 SLIRPQ9GZT3 109 aaKnown RBP11.66□□□□□ -0.54
HLCS-201ENST00000336648 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
HLCS-201ENST00000336648 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 CRYBA1P05813 215 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 SP1P08047 785 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 AVPR2P30518 371 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 ZNF766Q5HY98 468 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 GLCCI1Q86VQ1 547 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 C5P01031 1676 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 MYH9P35579 1960 aaKnown RBP11.66□□□□□ -0.54
HLCS-201ENST00000336648 MS4A18H0YCH9 400 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 MS4A18Q3C1V0 323 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 LRRC61Q9BV99 259 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 C9orf170A2RU37 121 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 CTDSPLO15194 276 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 ADAM20O43506 726 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 DHRS2Q13268 280 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 OR2C3Q8N628 320 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 OR2Z1Q8NG97 314 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 OR4C3Q8NH37 302 aa11.66□□□□□ -0.54
HLCS-201ENST00000336648 PLEKHB1Q9UF11 243 aaPredicted RBP11.66□□□□□ -0.54
HLCS-201ENST00000336648 RGPD5Q99666 1765 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 SPRY3O43610 288 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CCL7P80098 99 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 ZNF117Q03924 483 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 HFEQ30201 348 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 OR2D2Q9H210 308 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 LTB4R2Q9NPC1 389 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 TMEFF2Q9UIK5 374 aaPredicted RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 TMEM238LA0A1B0GVL6 79 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 A6NJY4 79 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 M0R3E3 92 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CORTO00230 105 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 LPAR5Q9H1C0 372 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CITO14578 2027 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 B4DEV8 164 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 LMX1BO60663 402 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 PCBP3P57721 371 aaKnown RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 TMEM267Q0VDI3 215 aaPredicted RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 ARHGAP5-AS1Q96IT6 56 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 NUDT16L1Q9BRJ7 211 aaKnown RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 ANGPTL4Q9BY76 406 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 SLC7A10Q9NS82 523 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 ZNF275Q9NSD4 429 aaPredicted RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 DNAJB12Q9NXW2 375 aaKnown RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.54
HLCS-201ENST00000336648 TBX21Q9UL17 535 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 ICAM5Q9UMF0 924 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 H3BP45 60 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CTAG2O75638 210 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 MELTFP08582 738 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CDAP32320 146 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 LIMK1P53667 647 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 OR5C1Q8NGR4 320 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 OR2T10Q8NGZ9 312 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 MRGPRX3Q96LB0 322 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 CXXC4Q9H2H0 198 aa11.65□□□□□ -0.54
HLCS-201ENST00000336648 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 GAGE10A6NGK3 116 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 ZNF253O75346 499 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 COX6CP09669 75 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 SRD5A2P31213 254 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 MIOXQ9UGB7 285 aa11.65□□□□□ -0.55
HLCS-201ENST00000336648 CYR61O00622 381 aa11.64□□□□□ -0.55
HLCS-201ENST00000336648 CDC14BO60729 498 aa11.64□□□□□ -0.55
HLCS-201ENST00000336648 FCGR3BO75015 233 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms