RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 IL18BPO95998 194 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 PF4V1P10720 104 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 RPUSD3Q6P087 351 aaKnown RBP6□□□□□ -1.45
SF3B1-201ENST00000335508 UNQ9370/PRO34162Q6UXP9 181 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 SLC51BQ86UW2 128 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 GALMQ96C23 342 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 MMP28Q9H239 520 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 TAAR3PQ9P1P4 343 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 MGST3O14880 152 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 CTAG2O75638 210 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 NDUFB6O95139 128 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 MPZL1O95297 269 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 RFPL3SP0C7P2 107 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 CA6P23280 308 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 C19orf48Q6RUI8 117 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 LILRB2Q8N423 598 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 OR10K1Q8NGX5 313 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 CMBLQ96DG6 245 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 MARS2Q96GW9 593 aaKnown RBP6□□□□□ -1.45
SF3B1-201ENST00000335508 PBDC1Q9BVG4 233 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 GAL3ST2Q9H3Q3 398 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 SAP30LQ9HAJ7 183 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 PLEKHA2Q9HB19 425 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 LIN7CQ9NUP9 197 aaKnown RBP6□□□□□ -1.45
SF3B1-201ENST00000335508 RNF7Q9UBF6 113 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 TUBD1Q9UJT1 453 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 NCR1O76036 304 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 THY1P04216 161 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 VSIG8P0DPA2 414 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 TDGF1P13385 188 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 TPT1P13693 172 aaKnown RBP6□□□□□ -1.45
SF3B1-201ENST00000335508 ADRA2CP18825 462 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 FCGR2CP31995 323 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 PDZK1IP1Q13113 114 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 H3F3CQ6NXT2 135 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 SKA3Q8IX90 412 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 OR5AP2Q8NGF4 316 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 POC1BQ8TC44 478 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 ELOVL5Q9NYP7 299 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 FBLN5Q9UBX5 448 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 ST6GALNAC2Q9UJ37 374 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 TINAGQ9UJW2 476 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 ARFGEF3Q5TH69 2177 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 BTBD17A6NE02 478 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 E9PLN8 166 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 CEACAM3P40198 252 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 RSPO4Q2I0M5 234 aaPredicted RBP6□□□□□ -1.45
SF3B1-201ENST00000335508 ZBTB34Q8NCN2 500 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 OR52N4Q8NGI2 321 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 OR10AC1Q8NH08 325 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 YIPF5Q969M3 257 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 VKORC1Q9BQB6 163 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 GHITMQ9H3K2 345 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 ANXA10Q9UJ72 324 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 K7EPK0 472 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 NTN1O95631 604 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FABP1P07148 127 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 RAB7AP51149 207 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SSTP61278 116 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LINC00596Q86U02 117 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PRR18Q8N4B5 295 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FAM71E2Q8N5Q1 922 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ABHD1Q96SE0 405 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PPP1R3EQ9H7J1 279 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MEIS3P1A6NDR6 274 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LRRC3CA6NJW4 275 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 CALCRP30988 508 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 NKX2-1P43699 371 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 NPY4RP50391 375 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR10A3P58181 314 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 RPS27AP62979 156 aaKnown RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 DHODHQ02127 395 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FCN2Q15485 313 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ACSF3Q4G176 576 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PDLIM3Q53GG5 364 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR52W1Q6IF63 320 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SPICQ8N5J4 248 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR1K1Q8NGR3 316 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR5H6Q8NGV6 325 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 VSTM2AQ8TAG5 236 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 FAM57AQ8TBR7 257 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF596Q8TC21 504 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 GLYATL2Q8WU03 294 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MARVELD1Q9BSK0 173 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 HRASLSQ9HDD0 168 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LPAR3Q9UBY5 353 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 M0QYG6 137 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 VDAC1P21796 283 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 DUSP1P28562 367 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 NANOS3P60323 173 aaKnown RBP5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LAIR2Q6ISS4 152 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 MDP1Q86V88 176 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SPACA3Q8IXA5 215 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 DUSP18Q8NEJ0 188 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 OR2Z1Q8NG97 314 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 LRRC29Q8WV35 223 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 SIGLEC12Q96PQ1 595 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 GSX2Q9BZM3 304 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 RHOFQ9HBH0 211 aa5.99□□□□□ -1.45
SF3B1-201ENST00000335508 PLEKHB1Q9UF11 243 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms