RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RTN4RL1Q86UN2 441 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 C5orf17Q8NAS9 161 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 PIK3IP1Q96FE7 263 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SLC22A20A6NK97 555 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 H3BMH7 237 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 M0R1B8 84 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 DDTP30046 118 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 NKAIN1Q4KMZ8 207 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SSX8Q7RTT4 187 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 TGIF2LYQ8IUE0 185 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 CXCL16Q9H2A7 254 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SH2D2AQ9NP31 389 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 IGLV3-10A0A075B6K4 115 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SH2D7A6NKC9 451 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 GCSHP23434 173 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 ACVR1Q04771 509 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 AESQ08117 197 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 OR5M9Q8NGP3 310 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 C16orf52Q8NHV5 167 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 DOT1LQ8TEK3 1739 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 A0A1W2PR80 420 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 RPS4Y1P22090 263 aaKnown RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 WNT3P56703 355 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 RPS23P62266 143 aaKnown RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SKP2Q13309 424 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 COX19Q49B96 90 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 HSF5Q4G112 596 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 OVCH2Q7RTZ1 564 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 WFDC5Q8TCV5 224 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 GAL3ST2Q9H3Q3 398 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 CITO14578 2027 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ZNF716A6NP11 495 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 CRHP06850 196 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 FABP2P12104 132 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 GUCA2BQ16661 112 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 TTC32Q5I0X7 151 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 TMEM255AQ5JRV8 349 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ZNF600Q6ZNG1 722 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 TMEM178AQ8NBL3 297 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ST8SIA1Q92185 356 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 MRPL37Q9BZE1 423 aaKnown RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ATP23Q9Y6H3 246 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 A0A1B0GTH9 108 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ABLIM3O94929 683 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 PPICP45877 212 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 GNG10P50151 68 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 IL10RAQ13651 578 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 KISS1Q15726 138 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 CLEC18BQ6UXF7 455 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 MOB3BQ86TA1 216 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 RSG1Q9BU20 258 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 CYR61O00622 381 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 SPATA46Q5T0L3 261 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 TIMD4Q96H15 378 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 TMEM56Q96MV1 263 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 PARP11Q9NR21 331 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ELF5Q9UKW6 265 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 CTDSPLO15194 276 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 PPM1DO15297 605 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 CRYAAP02489 173 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 KLKB1P03952 638 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 FGF2P09038 288 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 MNX1P50219 401 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 CPEB3Q8NE35 698 aaKnown RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 C17orf47Q8NEP4 570 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ADAMTS17Q8TE56 1095 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 PP6455Q8WZ26 134 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 MRPL13Q9BYD1 178 aaKnown RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 DEFB127Q9H1M4 99 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 SRSF10O75494 262 aaKnown RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 EIF3GO75821 320 aaKnown RBP eCLIP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ZFPL1O95159 310 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ACTL6AO96019 429 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 VMA21Q3ZAQ7 101 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 FAM78AQ5JUQ0 283 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 RBM14Q96PK6 669 aaKnown RBP8.75□□□□□ -1.01
COL4A6-201ENST00000334504 OR2A5Q96R48 311 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 HSPB9Q9BQS6 159 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 MIXL1Q9H2W2 232 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 OCIAD1Q9NX40 245 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 ZFP30Q9Y2G7 519 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 SIGLEC1Q9BZZ2 1709 aa8.75□□□□□ -1.01
COL4A6-201ENST00000334504 DLX1P56177 255 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 UBE2L3P68036 154 aaKnown RBP8.74□□□□□ -1.01
COL4A6-201ENST00000334504 KTI12Q96EK9 354 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-201ENST00000334504 MS4A4AQ96JQ5 239 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 ABHD14AQ9BUJ0 271 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 ARRDC1-AS1Q9H2J1 176 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 AURKAIP1Q9NWT8 199 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-201ENST00000334504 TECRQ9NZ01 308 aaKnown RBP8.74□□□□□ -1.01
COL4A6-201ENST00000334504 PAGE4O60829 102 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 P01737 135 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 PAFAH1B2P68402 229 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 SMIM21Q3B7S5 101 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 ARL6IP6Q8N6S5 226 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 ABHD3Q8WU67 409 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 OPN4Q9UHM6 478 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 RIGQ13278 110 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 FAM74A3Q4VXF1 159 aa8.74□□□□□ -1.01
COL4A6-201ENST00000334504 MUC15Q8N387 334 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms