RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CLDN14O95500 239 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 UBBP0CG47 229 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 M6PRP20645 277 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 TMEM69Q5SWH9 247 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 OR2W3Q7Z3T1 314 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 ZNF680Q8NEM1 530 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 OR10AD1Q8NGE0 317 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 GIMAP1Q8WWP7 306 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 GTF3AQ92664 365 aaKnown RBP19.8■□□□□ 0.76
TSEN54-201ENST00000333213 CPNE2Q96FN4 548 aaPredicted RBP19.8■□□□□ 0.76
TSEN54-201ENST00000333213 PLPPR2Q96GM1 343 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 CYYR1Q96J86 154 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 HIST1H2AAQ96QV6 131 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 CITED4Q96RK1 184 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 SYT3Q9BQG1 590 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 MRPL37Q9BZE1 423 aaKnown RBP19.8■□□□□ 0.76
TSEN54-201ENST00000333213 TMEM100Q9NV29 134 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 ZNF462Q96JM2 2506 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 COL12A1Q99715 3063 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.8■□□□□ 0.76
TSEN54-201ENST00000333213 A0A1B0GWJ7 208 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 TUBAL3A6NHL2 446 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 RAB27BO00194 218 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 CRYZL1O95825 349 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 MPIG6BO95866 241 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 SERPINA2P20848 420 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 AGAP20933 346 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 GDNFP39905 211 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 FAM76BQ5HYJ3 339 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 RTN4RL2Q86UN3 420 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 KCNG3Q8TAE7 436 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 LRRC46Q96FV0 321 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 HEXA-AS1Q9H8Q6 139 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 NGBQ9NPG2 151 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 ANKHD1Q8IWZ3 2542 aaKnown RBP19.79■□□□□ 0.76
TSEN54-201ENST00000333213 OR5B21A6NL26 309 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 CRTAPO75718 401 aaPredicted RBP19.79■□□□□ 0.76
TSEN54-201ENST00000333213 SFTPBP07988 381 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 TAS2R20P59543 309 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 GNG3P63215 75 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 SLC25A26Q70HW3 274 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 ACBD4Q8NC06 268 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 PXT1Q8NFP0 134 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 OR8S1Q8NH09 359 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 OR51F2Q8NH61 342 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 ELL3Q9HB65 397 aaPredicted RBP19.79■□□□□ 0.76
TSEN54-201ENST00000333213 DLL4Q9NR61 685 aa19.79■□□□□ 0.76
TSEN54-201ENST00000333213 SPTBN1Q01082 2364 aaKnown RBP19.79■□□□□ 0.76
TSEN54-201ENST00000333213 FLNCQ14315 2725 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 SHISA9B4DS77 424 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 CXCL3P19876 107 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 ZNF808Q8N4W9 903 aaPredicted RBP19.78■□□□□ 0.76
TSEN54-201ENST00000333213 C20orf85Q9H1P6 137 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 OR51I2Q9H344 312 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 ESRP2Q9H6T0 727 aaKnown RBP19.78■□□□□ 0.76
TSEN54-201ENST00000333213 IGHV3-64DA0A0J9YX35 117 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 MGMTP16455 207 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 NPBWR2P48146 333 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 KLF3P57682 345 aaPredicted RBP19.78■□□□□ 0.76
TSEN54-201ENST00000333213 SIGIRRQ6IA17 410 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 BATF2Q8N1L9 274 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 OR11H4Q8NGC9 324 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 S100A13Q99584 98 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 TMEM59Q9BXS4 323 aa19.78■□□□□ 0.76
TSEN54-201ENST00000333213 F8VVB4 439 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 F8VWA3 439 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 SYNGR1O43759 233 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 IFNA7P01567 189 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 CCR6P51684 374 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 RPS23P62266 143 aaKnown RBP19.77■□□□□ 0.76
TSEN54-201ENST00000333213 OR8G1Q15617 311 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 FAM209AQ5JX71 171 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 METTL11BQ5VVY1 283 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 OLFML2AQ68BL7 652 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 HAGHLQ6PII5 290 aaPredicted RBP19.77■□□□□ 0.76
TSEN54-201ENST00000333213 NEUROG1Q92886 237 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 MRPL24Q96A35 216 aaKnown RBP19.77■□□□□ 0.76
TSEN54-201ENST00000333213 CST11Q9H112 138 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 METTL9Q9H1A3 318 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 ZMAT3Q9HA38 289 aaKnown RBP19.77■□□□□ 0.76
TSEN54-201ENST00000333213 MTCH1Q9NZJ7 389 aa19.77■□□□□ 0.76
TSEN54-201ENST00000333213 TRAV18A0A075B6X5 111 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 F5H5P2 479 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 DNASE1P24855 282 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 VEGFCP49767 419 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 RPS27AP62979 156 aaKnown RBP19.76■□□□□ 0.75
TSEN54-201ENST00000333213 ZNF154Q13106 437 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 ADIPOQQ15848 244 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 HS3ST6Q96QI5 342 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 MICU1Q9BPX6 476 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 RTL8AQ9BWD3 113 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 AUNIPQ9H7T9 357 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 ATP23Q9Y6H3 246 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 ROS1P08922 2347 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 ZSCAN5BA6NJL1 495 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 C3orf80F5H4A9 247 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 PLAUP00749 431 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 MT-ND4P03905 459 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 C4BPBP20851 252 aa19.76■□□□□ 0.75
TSEN54-201ENST00000333213 RSU1Q15404 277 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms