RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 EXPH5Q8NEV8 1989 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 SHANK1Q9Y566 2161 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 YIF1AO95070 293 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 HIST3H3Q16695 136 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 ADPRHL1Q8NDY3 354 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 SLC22A8Q8TCC7 542 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 GPR173Q9NS66 373 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 LMO7DNF2Z398 122 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 DBHP09172 617 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 MTCP1P56278 107 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 RAB2AP61019 212 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 RAB1AP62820 205 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 HIST2H3AQ71DI3 136 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 ANKRD37Q7Z713 158 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 PLXDC1Q8IUK5 500 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 C20orf196Q8IYI0 205 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 WDSUB1Q8N9V3 476 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 NFAM1Q8NET5 270 aaPredicted RBP20.59■□□□□ 0.89
TSKU-201ENST00000333090 GGACTQ9BVM4 153 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 SLC2A9Q9NRM0 540 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 HDGFL3Q9Y3E1 203 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 RFNGQ9Y644 331 aa20.59■□□□□ 0.89
TSKU-201ENST00000333090 FAM221AA4D161 298 aa20.58■□□□□ 0.89
TSKU-201ENST00000333090 ST8SIA3O43173 380 aa20.58■□□□□ 0.89
TSKU-201ENST00000333090 SPRY1O43609 319 aaPredicted RBP20.58■□□□□ 0.89
TSKU-201ENST00000333090 KIAA0141Q14154 515 aaPredicted RBP20.58■□□□□ 0.89
TSKU-201ENST00000333090 BRICD5Q6PL45 260 aa20.58■□□□□ 0.89
TSKU-201ENST00000333090 GALNT14Q96FL9 552 aa20.58■□□□□ 0.89
TSKU-201ENST00000333090 TOLLIPQ9H0E2 274 aa20.58■□□□□ 0.89
TSKU-201ENST00000333090 MMP24Q9Y5R2 645 aa20.58■□□□□ 0.89
TSKU-201ENST00000333090 A0A0U1RQV5 110 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 IGFBP4P22692 258 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 DUSP1P28562 367 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 CEBPGP53567 150 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 EIF3IQ13347 325 aaKnown RBP20.58■□□□□ 0.88
TSKU-201ENST00000333090 SLC25A53Q5H9E4 307 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 LIAT1Q6ZQX7 453 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 NAXEQ8NCW5 288 aa20.58■□□□□ 0.88
TSKU-201ENST00000333090 MARS2Q96GW9 593 aaKnown RBP20.58■□□□□ 0.88
TSKU-201ENST00000333090 H7C1Q1 480 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 TLX3O43711 291 aaPredicted RBP20.57■□□□□ 0.88
TSKU-201ENST00000333090 HEXBP07686 556 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 MSR1P21757 451 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 CTSSP25774 331 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 LMO1P25800 156 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 GJC3Q8NFK1 279 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 SLAMF9Q96A28 289 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 CA14Q9ULX7 337 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 FBP1P09467 338 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 MSX1P28360 303 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 RSU1Q15404 277 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 HEPN1Q6WQI6 88 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 LFNGQ8NES3 379 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 OR11L1Q8NGX0 322 aa20.57■□□□□ 0.88
TSKU-201ENST00000333090 ZNF501Q96CX3 271 aaPredicted RBP20.57■□□□□ 0.88
TSKU-201ENST00000333090 CCDC187A0A096LP49 1063 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 IL13RA2Q14627 380 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 SUCNR1Q9BXA5 334 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 FAM230AA0A1W2PPH8 454 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 A0A1W2PR77 199 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 K7N7A8 449 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 DUX1O43812 170 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 PTGDSP41222 190 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 CSNK1A1P48729 337 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 CCL20P78556 96 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 RSPO1Q2MKA7 263 aaPredicted RBP20.56■□□□□ 0.88
TSKU-201ENST00000333090 C18orf12Q96KH6 178 aa20.56■□□□□ 0.88
TSKU-201ENST00000333090 PAPOLGQ9BWT3 736 aaKnown RBP20.56■□□□□ 0.88
TSKU-201ENST00000333090 PHF1O43189 567 aaPredicted RBP20.55■□□□□ 0.88
TSKU-201ENST00000333090 PRSS12P56730 875 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 LSM6P62312 80 aaKnown RBP20.55■□□□□ 0.88
TSKU-201ENST00000333090 MEX3BQ6ZN04 569 aaKnown RBP20.55■□□□□ 0.88
TSKU-201ENST00000333090 C1QL4Q86Z23 238 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 TSTD1Q8NFU3 115 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 MR1Q95460 341 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 METTL9Q9H1A3 318 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 ZNF727A8MUV8 499 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 M0R135 149 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 OR2J2O76002 312 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 HTR5AP47898 357 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 HNRNPKP61978 463 aaKnown RBP eCLIP20.55■□□□□ 0.88
TSKU-201ENST00000333090 GNMTQ14749 295 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 SLC22A25Q6T423 547 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 LGI3Q8N145 548 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 MSI2Q96DH6 328 aaKnown RBP20.55■□□□□ 0.88
TSKU-201ENST00000333090 ZNF799Q96GE5 643 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 NELFAQ9H3P2 528 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 IGHV1OR15-9A0A0B4J2B8 117 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 AQP7P3A6NL99 342 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 CDRT15L2A8MXV6 281 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 NOVA1P51513 510 aaKnown RBP20.55■□□□□ 0.88
TSKU-201ENST00000333090 EWSR1Q01844 656 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■■■■□ 24.6
TSKU-201ENST00000333090 ENDOGQ14249 297 aaKnown RBP20.55■□□□□ 0.88
TSKU-201ENST00000333090 PHYHD1Q5SRE7 291 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 ABHD14AQ9BUJ0 271 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 PLEK2Q9NYT0 353 aa20.55■□□□□ 0.88
TSKU-201ENST00000333090 AFF3P51826 1226 aaKnown RBP20.54■□□□□ 0.88
TSKU-201ENST00000333090 SNAI3Q3KNW1 292 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 OR2B11Q5JQS5 317 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 C9orf152Q5JTZ5 239 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms