RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 C5orf17Q8NAS9 161 aa9.43□□□□□ -0.9
CLN8-201ENST00000331222 OR8B3Q8NGG8 313 aa9.43□□□□□ -0.9
CLN8-201ENST00000331222 CIB3Q96Q77 187 aaPredicted RBP9.43□□□□□ -0.9
CLN8-201ENST00000331222 OR8B2Q96RD0 313 aa9.43□□□□□ -0.9
CLN8-201ENST00000331222 HSBP1O75506 76 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 FOXO1Q12778 655 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 PWWP2BQ6NUJ5 590 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 ASCL3Q9NQ33 180 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 HILPDAQ9Y5L2 63 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 YLPM1P49750 1951 aaKnown RBP9.42□□□□□ -0.9
CLN8-201ENST00000331222 IGHV3OR16-10A0A075B7F0 116 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 A0A1W2PPE3 182 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 PATE3B3GLJ2 98 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 FOXL2P58012 376 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 ACER2Q5QJU3 275 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 MOGAT3Q86VF5 341 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 PIK3IP1Q96FE7 263 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 TNFRSF12AQ9NP84 129 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 SRCAPQ6ZRS2 3230 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 EML2O95834 649 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 HOXB3P14651 431 aaPredicted RBP9.42□□□□□ -0.9
CLN8-201ENST00000331222 TMEM92Q6UXU6 159 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 POMT2Q9UKY4 750 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 AMMECR1Q9Y4X0 333 aaPredicted RBP9.42□□□□□ -0.9
CLN8-201ENST00000331222 MASP2O00187 686 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 TTRP02766 147 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 TSPO2Q5TGU0 170 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 WDR88Q6ZMY6 472 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 ANKRD33Q7Z3H0 272 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 POM121Q96HA1 1249 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 SIRT3Q9NTG7 399 aaPredicted RBP9.42□□□□□ -0.9
CLN8-201ENST00000331222 SSC5DA1L4H1 1573 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 PLXNB2O15031 1838 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 IFITM5A6NNB3 132 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 PHOX2AO14813 284 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 TOX3O15405 576 aaPredicted RBP9.42□□□□□ -0.9
CLN8-201ENST00000331222 AREGP15514 252 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 WNT5AP41221 380 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 DPTQ07507 201 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 AQP6Q13520 282 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 SSPNQ14714 243 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 KISS1Q15726 138 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 OR13F1Q8NGS4 319 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 ABHD3Q8WU67 409 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 C2orf50Q96LR7 162 aa9.42□□□□□ -0.9
CLN8-201ENST00000331222 TMEM272A0A1B0GTI8 110 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 PRSS1P07477 247 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 ETV6P41212 452 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 ACAA2P42765 397 aaKnown RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 FAM122BQ7Z309 247 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 LYG2Q86SG7 212 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 CDX2Q99626 313 aaPredicted RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 BCL3P20749 454 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 ZBTB44Q8NCP5 570 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 OR13G1Q8NGZ3 307 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 DOK1Q99704 481 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 CHRDL1Q9BU40 450 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 MS4A7Q9GZW8 240 aaPredicted RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 YTHDF2Q9Y5A9 579 aaKnown RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 MRPS18BQ9Y676 258 aaKnown RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 TRAV39A0A0B4J263 110 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 HELTA6NFD8 242 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 UBE2L6O14933 153 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 ADRB1P08588 477 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 FBP1P09467 338 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 SPNP16150 400 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 OR3A1P47881 315 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 DHODHQ02127 395 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 CD276Q5ZPR3 534 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 SAP30LQ9HAJ7 183 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 VSIG4Q9Y279 399 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 CABIN1Q9Y6J0 2220 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 RNPS1Q15287 305 aaKnown RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 FOCADQ5VW36 1801 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 A1L4Q6 167 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 CIDEAO60543 219 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 PNPP00491 289 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 HRASP01112 189 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 GP2P55259 537 aaKnown RBP9.41□□□□□ -0.9
CLN8-201ENST00000331222 TRAT1Q6PIZ9 186 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 PIGMQ9H3S5 423 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 RALGAPA1Q6GYQ0 2036 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 PJVKQ0ZLH3 352 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 ZNF429Q86V71 674 aa9.41□□□□□ -0.9
CLN8-201ENST00000331222 ZNF117Q03924 483 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 HIKESHIQ53FT3 197 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 PELI3Q8N2H9 469 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 GVQW1Q8N7I0 195 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 PRO1933Q9H354 126 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 GABRB1P18505 474 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 RAB7AP51149 207 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 PMS2P11Q13670 270 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
CLN8-201ENST00000331222 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms