RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 POLR2IP36954 125 aaKnown RBP11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 GSK3AP49840 483 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 EFNB1P98172 346 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 ROM1Q03395 351 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 MICBQ29980 383 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 MEDAGQ5VYS4 303 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 ZNF322Q6U7Q0 402 aaPredicted RBP11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 COMMD2Q86X83 199 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 SLC35F2Q8IXU6 374 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 HIST1H2AAQ96QV6 131 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 OR8B4Q96RC9 309 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 P2RX4Q99571 388 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 ABCB10Q9NRK6 738 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 CLN6Q9NWW5 311 aa11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 ZNF256Q9Y2P7 627 aaPredicted RBP11.77□□□□□ -0.53
CTHRC1-201ENST00000330295 A0A1W2PQ09 198 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 hCG_1807616A0A1W2PRN6 198 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 M0R129 80 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 MPZL2O60487 215 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 KRT8P05787 483 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 OR2T7P0C7T2 308 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 MYCNOSP40205 109 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 HCCSP53701 268 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 CXCR4P61073 352 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 FAM3AP98173 230 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 PRSS45Q7RTY3 260 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 BCDIN3DQ7Z5W3 292 aaKnown RBP11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 SATL1Q86VE3 508 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 OR2T27Q8NH04 317 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 MRPL48Q96GC5 212 aaKnown RBP11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 HRASLS5Q96KN8 279 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 MICU1Q9BPX6 476 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 PAPOLGQ9BWT3 736 aaKnown RBP11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 KLHDC2Q9Y2U9 406 aa11.76□□□□□ -0.53
CTHRC1-201ENST00000330295 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 A6NLC8 198 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 H0YAE9 185 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 MTRF1O75570 445 aaKnown RBP11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 FRMD6-AS1P0C7T7 363 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 SELLP14151 372 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 MAP2K3P46734 347 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 LGALS4P56470 323 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 ZSCAN26Q16670 478 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 ZIK1Q3SY52 487 aaPredicted RBP11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 C9orf66Q5T8R8 295 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 C8orf86Q6ZUL3 223 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 THAP5Q7Z6K1 395 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 DYNAPQ8N1N2 210 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 Q96MT0 163 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 ADGRL4Q9HBW9 690 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 C8orf4Q9NR00 106 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 GTF2A1LQ9UNN4 478 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 GMPPBQ9Y5P6 360 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 MPC1Q9Y5U8 109 aa11.75□□□□□ -0.53
CTHRC1-201ENST00000330295 SORL1Q92673 2214 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 hCG_38984A0A1B0GV85 526 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 LOC110117498-PIK3R3F6TDL0 507 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 PSMD9O00233 223 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 GRPP07492 148 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 MYF6P23409 242 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 TGM4P49221 684 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 SNRPGP62308 76 aaKnown RBP11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 SLC25A30Q5SVS4 291 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 BCL2L15Q5TBC7 163 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 ZNF555Q8NEP9 628 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 OR10H4Q8NGA5 316 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 OR8B12Q8NGG6 310 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 LYZL4Q96KX0 146 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 TM2D3Q9BRN9 247 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 RTL8AQ9BWD3 113 aa11.74□□□□□ -0.53
CTHRC1-201ENST00000330295 SULT1C4O75897 302 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 AMY2BP19961 511 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 RPL23AP62750 156 aaKnown RBP11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 ACTC1P68032 377 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 ACTA1P68133 377 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 PLEKHG7Q6ZR37 379 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 C18orf65Q6ZTR6 163 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 FAM220AQ7Z4H9 259 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 LHFPL4Q7Z7J7 247 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 YIPF7Q8N8F6 280 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 APOL4Q9BPW4 351 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 PBOV1Q9GZY1 135 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 FAM206AQ9NX38 181 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 NUFIP1Q9UHK0 495 aaKnown RBP11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 SCOCQ9UIL1 159 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 RHBDD3Q9Y3P4 386 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 SNX5Q9Y5X3 404 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 R4GMQ9 66 aa11.73□□□□□ -0.53
CTHRC1-201ENST00000330295 METTL15A6NJ78 407 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 LY86O95711 162 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 CST4P01036 141 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 SLC6A1P30531 599 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms