RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CCR4P51679 360 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 REEP5Q00765 189 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 PMS2P11Q13670 270 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 RUNX2Q13950 521 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 MRPL14Q6P1L8 145 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 MED25Q71SY5 747 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 GALNTL5Q7Z4T8 443 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF584Q8IVC4 421 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 OR2T27Q8NH04 317 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 MARCH1Q8TCQ1 289 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 FAM3DQ96BQ1 224 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 RPH3ALQ9UNE2 315 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 TNRC6AQ8NDV7 1962 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 NSG1A0A0A6YYJ2 146 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 CENPVL1A0A0U1RR11 272 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 ZNHIT1O43257 154 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 CDC40O60508 579 aaKnown RBP eCLIP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 CYB5R3P00387 301 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 CST4P01036 141 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 RAC2P15153 192 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 RPL4P36578 427 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 TGM3Q08188 693 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 P2RY6Q15077 328 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 PRR30Q53SZ7 412 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 OIT3Q8WWZ8 545 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 SH3BGRL3Q9H299 93 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 METTL8Q9H825 291 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 FOXD3Q9UJU5 478 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 POLR3KQ9Y2Y1 108 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 MED12Q93074 2177 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 TMPRSS11DO60235 418 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 NSA2O95478 260 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 HIST1H1CP16403 213 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 HRH1P35367 487 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 WNT5AP41221 380 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 CX3CR1P49238 355 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 POLR2HP52434 150 aaKnown RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 ELLP55199 621 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-201ENST00000318023 PRPS1P60891 318 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF793Q6ZN11 406 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 OR5AK2Q8NH90 309 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 MS4A6EQ96DS6 147 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 SLC17A5Q9NRA2 495 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 KLHL28Q9NXS3 571 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 ESPL1Q14674 2120 aa8.24□□□□□ -1.09
CAPN3-201ENST00000318023 A6NIZ1 184 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ELOA3DA6NLF2 546 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-201ENST00000318023 CCL25O15444 150 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 LMO1P25800 156 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 RPS27P42677 84 aaKnown RBP8.23□□□□□ -1.09
CAPN3-201ENST00000318023 TMEM33P57088 247 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 RAP1BP61224 184 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ELOA3BQ3SY89 546 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 GXYLT1Q4G148 440 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF880Q6PDB4 577 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ELOA3Q8NG57 546 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 OR13D1Q8NGV5 346 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ZPLD1Q8TCW7 415 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 BPIFA2Q96DR5 249 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 PBDC1Q9BVG4 233 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 OR11A1Q9GZK7 315 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 OR8D2Q9GZM6 311 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 BCL2L10Q9HD36 194 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 SIGLEC7Q9Y286 467 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 C20orf202A1L168 122 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 XKRY2A2RUG3 117 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 XKRYO14609 159 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 RCBTB2O95199 551 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 GCGP01275 180 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 IL6RP08887 468 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-201ENST00000318023 FCGR2CP31995 323 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 SLC35A1P78382 337 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 CCL20P78556 96 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 CYCSP99999 105 aaKnown RBP8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF550Q7Z398 422 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 COMMD1Q8N668 190 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF321PQ8N8H1 164 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 FAM213BQ8TBF2 198 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 TMEM239Q8WW34 195 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 ERGIC1Q969X5 290 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 CMBLQ96DG6 245 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 TNFRSF13CQ96RJ3 184 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 PRRT1Q99946 306 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 PRSS27Q9BQR3 290 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 EFCAB11Q9BUY7 163 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 NCOR1P1Q9H4R4 102 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 FRRS1LQ9P0K9 344 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 V9GYS6 101 aa8.23□□□□□ -1.09
CAPN3-201ENST00000318023 NUP210LQ5VU65 1888 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 DNAJC13O75165 2243 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 TMEM238LA0A1B0GVL6 79 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 M0QZK8 103 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 B3GALT2O43825 422 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 GGCTO75223 188 aaKnown RBP8.22□□□□□ -1.09
CAPN3-201ENST00000318023 TK1P04183 234 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 NID1P14543 1247 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms