RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 NPTNQ9Y639 398 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 COL5A1P20908 1838 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PPIAL4EA0A075B759 164 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PPIAL4DF5H284 164 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 IFNA10P01566 189 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 HLA-HP01893 362 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PPIAL4FP0DN26 164 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 NAT2P11245 290 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 OR2T2Q6IF00 324 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 MFSD4AQ8N468 514 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 OR51A4Q8NGJ6 313 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 TSNAXQ99598 290 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 GON7Q9BXV9 100 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC7A10Q9NS82 523 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PLEKHB1Q9UF11 243 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PPIAL4AQ9Y536 164 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 GOSR1O95249 250 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 RFPL3SP0C7P2 107 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC2A1P11166 492 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 C2orf76Q3KRA6 126 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 C1orf100Q5SVJ3 147 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PRAMEF5Q5TYX0 476 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PRAMEF6Q5VXH4 476 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 BRICD5Q6PL45 260 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 Q6ZS92 163 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 OR8B12Q8NGG6 310 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 SRXN1Q9BYN0 137 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 TMEM231Q9H6L2 316 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 RHOFQ9HBH0 211 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 GSTZ1O43708 216 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 FOXL2NBQ6ZUU3 175 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 PRSS35Q8N3Z0 413 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 PLPP7Q8NBV4 271 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 OR5D18Q8NGL1 313 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ASB13Q8WXK3 278 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 CHODLQ9H9P2 273 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 DEPPQ9NTK1 212 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 LHFPL6Q9Y693 200 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 A0A1W2PPV4 95 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF716A6NP11 495 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 OR4A8P0C604 315 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 CBR1P16152 277 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 CSN1S1P47710 185 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 PTH2RP49190 550 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 SFRP5Q5T4F7 317 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 NSUN5P2Q63ZY6 315 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 OSR2Q8N2R0 312 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 NANPQ8TBE9 248 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 RDH5Q92781 318 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 HIF1ANQ9NWT6 349 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ZMIZ1Q9ULJ6 1067 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 MAGEB4O15481 346 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 LY86O95711 162 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 GPM6AP51674 278 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 HBG1P69891 147 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 HBG2P69892 147 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 Q6ZT83 130 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ST6GALNAC3Q8NDV1 305 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 MESP1Q9BRJ9 268 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 RNF167Q9H6Y7 350 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 LPAR2Q9HBW0 351 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 SS18L1O75177 396 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 IGFL2Q6UWQ7 119 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 OR1K1Q8NGR3 316 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 WDYHV1Q96HA8 205 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ADTRPQ96IZ2 230 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 FZR1Q9UM11 496 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ACACAQ13085 2346 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ZSCAN5BA6NJL1 495 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 TSPAN4O14817 238 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 TTRP02766 147 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 CAV2P51636 162 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 B3GALT5-AS1P59052 145 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 PRDX4Q13162 271 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 MPPED2Q15777 294 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 KRBOX4Q5JUW0 171 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ATP1A1-AS1Q5TC04 95 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF626Q68DY1 528 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF485Q8NCK3 441 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 HEYLQ9NQ87 328 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 NLKQ9UBE8 527 aa7.47□□□□□ -1.21
PDLIM5-201ENST00000317968 IL18BPO95998 194 aa7.46□□□□□ -1.21
PDLIM5-201ENST00000317968 APOBEC3AP31941 199 aaPredicted RBP7.46□□□□□ -1.21
PDLIM5-201ENST00000317968 KIR3DL2P43630 455 aa7.46□□□□□ -1.21
PDLIM5-201ENST00000317968 OR13C5Q8NGS8 318 aa7.46□□□□□ -1.21
PDLIM5-201ENST00000317968 SULT4A1Q9BR01 284 aa7.46□□□□□ -1.21
PDLIM5-201ENST00000317968 TRBV23-1A0A0A0MS06 115 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A10PA6NDY2 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A18PA6NE21 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A16PA6NEW6 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A20PA6NIJ5 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A8PA6NJQ4 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A7PA6NKC0 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A22PA8MWA6 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A12PA8MX19 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A5PA8MXJ8 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A23PA8MXZ1 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 EFNA2O43921 213 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 MPZL1O95297 269 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A15PP0C7V4 464 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms