RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CYR61O00622 381 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 P01737 135 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 IL24Q13007 206 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 LDLRAD1Q5T700 205 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 LINC00596Q86U02 117 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 H3BVH4 76 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 PAFAH1B2P68402 229 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF646O15015 1829 aaPredicted RBP13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ADAM20O43506 726 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 FGF9P31371 208 aaPredicted RBP13.87□□□□□ -0.19
HCFC1-201ENST00000310441 MLF1P58340 268 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 C5orf17Q8NAS9 161 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 KTI12Q96EK9 354 aaPredicted RBP13.87□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM9BQ9NQ34 198 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 PYCARD-AS1I3L0S3 204 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 CST7O76096 145 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 KIR3DL2P43630 455 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 CLDN18P56856 261 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ANKRD55Q3KP44 614 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 OR5M1Q8NGP8 315 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 DYRK2Q92630 601 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ZGLP1P0C6A0 271 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 MEOX2P50222 304 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 IL11RAQ14626 422 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM207Q6UWW9 146 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 NRG2O14511 850 aaPredicted RBP13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ABLIM3O94929 683 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 PKIAP61925 76 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 SSX1Q16384 188 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 TEX37Q96LM6 180 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 LYPD8Q6UX82 237 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 LSMEM1Q8N8F7 131 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF236Q9UL36 1845 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 SLC6A12P48065 614 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM211Q6ICI0 200 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 NT5CQ8TCD5 201 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 ZFP30Q9Y2G7 519 aa13.87□□□□□ -0.19
HCFC1-201ENST00000310441 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 SLC35E4Q6ICL7 350 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 RPS4Y2Q8TD47 263 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 EID2BQ96D98 161 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 GABRG3Q99928 467 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 LOC102724200A0A096LPH7 203 aaPredicted RBP13.86□□□□□ -0.19
HCFC1-201ENST00000310441 BTF3P20290 206 aaKnown RBP13.86□□□□□ -0.19
HCFC1-201ENST00000310441 DHRS2Q13268 280 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM108Q6UXF1 575 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 FAHP16930 419 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF547Q8IVP9 402 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 WDFY2Q96P53 400 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 C1QTNF6Q9BXI9 259 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 B9D1Q9UPM9 204 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 CTF1Q16619 201 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 C6orf201Q7Z4U5 140 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 OR1B1Q8NGR6 318 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 PIK3IP1Q96FE7 263 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 TCFL5Q9UL49 500 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 LRP12Q9Y561 859 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 C3orf85A0A1B0GTC6 90 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 CDRT15L2A8MXV6 281 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 MELTFP08582 738 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 GLI4P10075 376 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 ZBP1Q9H171 429 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 PPT2Q9UMR5 302 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 DUSP2Q05923 314 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF788Q6ZQV5 615 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 LINC00615Q96LM1 132 aaPredicted RBP13.86□□□□□ -0.19
HCFC1-201ENST00000310441 OR2A5Q96R48 311 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 CCL26Q9Y258 94 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 A0A087WUJ7 227 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 LILRA5A6NI73 299 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 FNDC7Q5VTL7 733 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 OR13H1Q8NG92 308 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 GLRX2Q9NS18 164 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM38BQ9NVV0 291 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 TBC1D29Q9UFV1 150 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 WNK3Q9BYP7 1800 aa13.86□□□□□ -0.19
HCFC1-201ENST00000310441 SULT1A1P50225 295 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 OR5AU1Q8NGC0 362 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 C20orf27Q9GZN8 174 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 PPIL1Q9Y3C6 166 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 PLPP2O43688 288 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 GSTZ1O43708 216 aaPredicted RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 STAG3L3P0CL85 134 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 OR10J1P30954 320 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 DEFB103AP81534 67 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 MRM1Q6IN84 353 aaKnown RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 HIST1H1DP16402 221 aaKnown RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 RPL29P47914 159 aaKnown RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 DHRS13Q6UX07 377 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 SIGLEC11Q96RL6 698 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 HSD17B10Q99714 261 aaKnown RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 CNOT1A5YKK6 2376 aaKnown RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 ACVR1Q04771 509 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 SCMH1Q96GD3 660 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 NXF2Q9GZY0 626 aaKnown RBP13.85□□□□□ -0.19
HCFC1-201ENST00000310441 F11P03951 625 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 KISS1Q15726 138 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms