RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 HHLA2Q9UM44 414 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PRELID3BQ9Y3B1 194 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 LIPGQ9Y5X9 500 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 R4GMQ9 66 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CADP27708 2225 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 IGKV3D-11A0A0A0MRZ8 115 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 TEX13DA0A0J9YY54 714 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 TVP23AA6NH52 213 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 FAM171A2A8MVW0 826 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DIRC3C9JPN6 131 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ATP6V1G2-DDX39BF2Z307 99 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 F8VVB4 439 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 F8VWA3 439 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 H0YC42 278 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PSMD9O00233 223 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF354AO60765 605 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 MTRF1O75570 445 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 KDM4BO94953 1096 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DUS4LO95620 317 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 RLN2P04090 185 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ERCC1P07992 297 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CHRM2P08172 466 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CYC1P08574 325 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PTHLHP12272 177 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 LYL1P12980 280 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 GRPRP30550 384 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CHRNB4P30926 498 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CBX5P45973 191 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 SLC6A9P48067 706 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DNASE1L1P49184 302 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CX3CR1P49238 355 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 POLR2HP52434 150 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 EIF5AP63241 154 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 OC90Q02509 493 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF117Q03924 483 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 GLO1Q04760 184 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PMPCAQ10713 525 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PLA2G7Q13093 441 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 NSDHLQ15738 373 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CD226Q15762 336 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 STK11Q15831 433 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 EXT1Q16394 746 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ACKR1Q16570 336 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF260Q3ZCT1 412 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 RNASE10Q5GAN6 216 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PDSS1Q5T2R2 415 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 FAAP20Q6NZ36 180 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DRAM2Q6UX65 266 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF813Q6ZN06 617 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DOK3Q7L591 496 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 OR2W3Q7Z3T1 314 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 BIVMQ86UB2 503 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF584Q8IVC4 421 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 BPIFB2Q8N4F0 458 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZFP62Q8NB50 900 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM178AQ8NBL3 297 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 INO80EQ8NBZ0 244 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 APCDD1LQ8NCL9 501 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 SLC30A7Q8NEW0 376 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM185AQ8NFB2 350 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 OR4D10Q8NGI6 311 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 OR10AC1Q8NH08 325 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 OR52N5Q8NH56 324 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF563Q8TA94 476 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 THAP6Q8TBB0 222 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DUSP19Q8WTR2 217 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PTPMT1Q8WUK0 201 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ASB10Q8WXI3 467 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 FAM46BQ96A09 425 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ADIPOR1Q96A54 375 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 KTI12Q96EK9 354 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 SLC25A44Q96H78 314 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 SCGB3A2Q96PL1 93 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 PHB2Q99623 299 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF416Q9BWM5 594 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 NMES1Q9C002 83 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CHST6Q9GZX3 395 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 NXF5Q9H1B4 397 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 DEFB127Q9H1M4 99 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 SYT4Q9H2B2 425 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 FANCFQ9NPI8 374 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM100Q9NV29 134 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 MRPL22Q9NWU5 206 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 TAS2R3Q9NYW6 316 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 KCNG2Q9UJ96 466 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 FBXL2Q9UKC9 423 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CARHSP1Q9Y2V2 147 aaKnown RBP4.24□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF175Q9Y473 711 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 FAM215AQ9Y5M1 114 aa4.24□□□□□ -1.73
CKS1B-201ENST00000308987 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TMED7-TICAM2A0A0A6YYA0 188 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 LOC107986453A0A1B0GWG9 222 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 A0A1W2PPR1 153 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM218A2RU14 115 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 C9orf170A2RU37 121 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 A8MUA0 341 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 C17orf105B2RV13 164 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 NPIPA2E9PIF3 369 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms