RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RPS4Y1P22090 263 aaKnown RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 FABP5Q01469 135 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 IZUMO4Q1ZYL8 232 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 TAAR3PQ9P1P4 343 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 F11RQ9Y624 299 aaKnown RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 CST4P01036 141 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 IGHV3-7P01780 117 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 A0A1B0GV72 72 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 ICOSLGO75144 302 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 BCORP1Q8N888 145 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 ZNF418Q8TF45 676 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 SNRNP40Q96DI7 357 aaKnown RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 C10orf71Q711Q0 1435 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 FUT7Q11130 342 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 GGTA1PQ4G0N0 100 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 C1QTNF12Q5T7M4 302 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 NEURL2Q9BR09 285 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 TMEM38AQ9H6F2 299 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 OR2W5A6NFC9 320 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 TCEAL1Q15170 157 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 FZD9O00144 591 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 COX7A1P24310 79 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 RELQ04864 619 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 MICBQ29980 383 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 SPATA45Q537H7 98 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 FBXL14Q8N1E6 418 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 THYN1Q9P016 225 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 JUNBP17275 347 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-201ENST00000306085 LPAR3Q9UBY5 353 aa12.04□□□□□ -0.48
TRIM56-201ENST00000306085 GP2P55259 537 aaKnown RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 RPL18Q07020 188 aaKnown RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 MRGPREQ86SM8 312 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 DYNLT3P51808 116 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SEZ6L2Q6UXD5 910 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 MTURNQ8N3F0 131 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SMIM14Q96QK8 99 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 TRAV8-7A0A075B6U6 113 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 TMEM215Q68D42 235 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 FGF13Q92913 245 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 ISOC2Q96AB3 205 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SPNP16150 400 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SPANXN1Q5VSR9 72 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 RAB40CQ96S21 281 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 OCIAD1Q9NX40 245 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 FIGNL2A6NMB9 653 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 PRSS2P07478 247 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 EPXP11678 715 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 ZNF880Q6PDB4 577 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SIT1Q9Y3P8 196 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 FAM181BA6NEQ2 426 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 GSTZ1O43708 216 aaPredicted RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 SMPD2O60906 423 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 MT-CO3P00414 261 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 CCR2P41597 374 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 DUSP5Q16690 384 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 ZNF740Q8NDX6 193 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 DERL3Q96Q80 235 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 IVDP26440 423 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 KIR3DL2P43630 455 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 DIO1P49895 249 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 CDC14BO60729 498 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 FKBP2P26885 142 aaKnown RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 NUDT16L1Q9BRJ7 211 aaKnown RBP12.03□□□□□ -0.48
TRIM56-201ENST00000306085 PNLIPRP3Q17RR3 467 aa12.03□□□□□ -0.48
TRIM56-201ENST00000306085 GABRA1P14867 456 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 LINC00303Q3SY05 128 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 SLC48A1Q6P1K1 146 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 RABAC1Q9UI14 185 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 PRSS37A4D1T9 235 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 IGHV4-34P06331 123 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 HIST1H1EP10412 219 aaKnown RBP12.02□□□□□ -0.48
TRIM56-201ENST00000306085 MS4A8Q9BY19 250 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 SPATA31D1Q6ZQQ2 1576 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 IGKV6D-41A0A0C4DH26 115 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 EVX1P49640 407 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 AWAT1Q58HT5 328 aa12.02□□□□□ -0.48
TRIM56-201ENST00000306085 FUT6P51993 359 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 PRRX1P54821 245 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 MRPL58Q14197 206 aaKnown RBP12.02□□□□□ -0.49
TRIM56-201ENST00000306085 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 B3GALT4O96024 378 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 BSGP35613 385 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 LPAR6P43657 344 aa12.02□□□□□ -0.49
TRIM56-201ENST00000306085 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.02□□□□□ -0.49
TRIM56-201ENST00000306085 AMMECR1Q9Y4X0 333 aaPredicted RBP12.02□□□□□ -0.49
TRIM56-201ENST00000306085 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms