RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 GPR32P1Q8NGA4 272 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 NDRG1Q92597 394 aaKnown RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SORBS1Q9BX66 1292 aaKnown RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 MAGT1Q9H0U3 335 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 WDR13Q9H1Z4 485 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ICAM5Q9UMF0 924 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SIGLEC7Q9Y286 467 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 UFC1Q9Y3C8 167 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SHANK1Q9Y566 2161 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 EDIL3O43854 480 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ZFAND5O76080 213 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 OR5AL1P0C617 328 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 CD40P25942 277 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SULT1A1P50225 295 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 JAG1P78504 1218 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 MFAP5Q13361 173 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SRSF7Q16629 238 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 TP53I3Q53FA7 332 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 RGS7BPQ6MZT1 257 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SAXO1Q8IYX7 474 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 PNKDQ8N490 385 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 C17orf78Q8N4C9 275 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 OR1L3Q8NH93 324 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SF3B5Q9BWJ5 86 aaKnown RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 UQCR10Q9UDW1 63 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 A0A0A6YYD5 115 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 TMEM235A6NFC5 223 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 TAPBPO15533 448 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SLC37A1P57057 533 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 MLF2Q15773 248 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ALKBH6Q3KRA9 238 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 PWWP2BQ6NUJ5 590 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ZCCHC14Q8WYQ9 949 aaKnown RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 GPR87Q9BY21 358 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 GLIPR2Q9H4G4 154 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 RNF122Q9H9V4 155 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SEBOXQ9HB31 216 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 TRBV5-5A0A0J9YX44 114 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 LOC107986453A0A1B0GWG9 222 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 CTAG2O75638 210 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SNRPBP14678 240 aaKnown RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 FCGR2CP31995 323 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 PTGFRP43088 359 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ID2Q02363 134 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 OR7A5Q15622 319 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 NPSR1Q6W5P4 371 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SSC4DQ8WTU2 575 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ASB16Q96NS5 453 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 FAM103A1Q9BTL3 118 aaKnown RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ULBP3Q9BZM4 244 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 GSX1Q9H4S2 264 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 DUSP13Q9UII6 198 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 DAPP1Q9UN19 280 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 A8MV72 311 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-201ENST00000303395 WDR1O75083 606 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SLC19A1P41440 591 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 KIR3DL2P43630 455 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 PPOXP50336 477 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 HES3Q5TGS1 186 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 SLC35E4Q6ICL7 350 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ACSM6Q6P461 480 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 NPEPL1Q8NDH3 523 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 R3HDM4Q96D70 268 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 ULBP2Q9BZM5 246 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 GPR84Q9NQS5 396 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 CCL27Q9Y4X3 112 aa4.71□□□□□ -1.66
SCN1A-201ENST00000303395 PRSS37A4D1T9 235 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 HAX1O00165 279 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 PRKRAO75569 313 aaKnown RBP4.7□□□□□ -1.66
SCN1A-201ENST00000303395 FABP4P15090 132 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 TCL1AP56279 114 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 GAB1Q13480 694 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 LIPNQ5VXI9 398 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 OR2T10Q8NGZ9 312 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 HAPLN2Q9GZV7 340 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 OR1A1Q9P1Q5 309 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 SMIM30A4D0T7 59 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 M0R135 149 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 PLA2G10O15496 165 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 HCRTR1O43613 425 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 MUC1P15941 1255 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-201ENST00000303395 NTHL1P78549 312 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 DGCR2P98153 550 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 C1orf140Q5VVS0 124 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 UNQ9370/PRO34162Q6UXP9 181 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 Q6ZVU0 165 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 PAQR9Q6ZVX9 377 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 ZMYND19Q96E35 227 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF799Q96GE5 643 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 SDF2Q99470 211 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 NAA60Q9H7X0 242 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 TAAR2Q9P1P5 351 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 LY75O60449 1722 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 CTXND1A0A1B0GTU2 59 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 B4E171 279 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 SOD3P08294 240 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 ATF1P18846 271 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 SHC1P29353 583 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 DDTP30046 118 aa4.7□□□□□ -1.66
SCN1A-201ENST00000303395 PSMB10P40306 273 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms