RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 OR2V2Q96R30 315 aa12.74□□□□□ -0.37
UBXN1-202ENST00000301935 PIMREGQ9BSJ6 248 aa12.74□□□□□ -0.37
UBXN1-202ENST00000301935 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
UBXN1-202ENST00000301935 NXF2Q9GZY0 626 aaKnown RBP12.74□□□□□ -0.37
UBXN1-202ENST00000301935 SPATA2Q9UM82 520 aa12.74□□□□□ -0.37
UBXN1-202ENST00000301935 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
UBXN1-202ENST00000301935 TRAPPC2LH3BP13 241 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 H3BUI4 141 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 TPD52L2O43399 206 aaKnown RBP12.73□□□□□ -0.37
UBXN1-202ENST00000301935 NOS1APO75052 506 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-202ENST00000301935 GRPP07492 148 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 CAV3P56539 151 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 RSU1Q15404 277 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 ZNF181Q2M3W8 571 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 FAM120AOSQ5T036 256 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 HES5Q5TA89 166 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 GLIPR1L1Q6UWM5 242 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 SCCPDHQ8NBX0 429 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 OR4D6Q8NGJ1 314 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 OR11L1Q8NGX0 322 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 OR51F2Q8NH61 342 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 MCFD2Q8NI22 146 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 Q8TCH9 128 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 AQP3Q92482 292 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 HPS1Q92902 700 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 DVL3Q92997 716 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-202ENST00000301935 FGF23Q9GZV9 251 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-202ENST00000301935 CST11Q9H112 138 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 ING4Q9UNL4 249 aa12.73□□□□□ -0.37
UBXN1-202ENST00000301935 SMIM30A4D0T7 59 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 LRRC30A6NM36 301 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 KDM4BO94953 1096 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 CSTBP04080 98 aaKnown RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 RAB6AP20340 208 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 HNF1AP20823 631 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 NR4A2P43354 598 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 OR3A4PP47883 348 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 POU3F4P49335 361 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 MRPS11P82912 194 aaKnown RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 C2orf76Q3KRA6 126 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 DMRTC1Q5HYR2 192 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 HAGHLQ6PII5 290 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 CRIP3Q6Q6R5 217 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 SLC25A26Q70HW3 274 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 CALHM1Q8IU99 346 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 Q8NFD4 153 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 GTF3AQ92664 365 aaKnown RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 MSI2Q96DH6 328 aaKnown RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 VRK1Q99986 396 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-202ENST00000301935 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 RASL12Q9NYN1 266 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 ADAM30Q9UKF2 790 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 PEX16Q9Y5Y5 336 aa12.72□□□□□ -0.37
UBXN1-202ENST00000301935 IGHV4-61A0A0C4DH41 118 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 A6NLC8 198 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 CDIPTO14735 213 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 CLPXO76031 633 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 SCGNO76038 276 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 IRF2P14316 349 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 S100A5P33763 92 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 CCL8P80075 99 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 ELP2Q6IA86 826 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 WDR86Q86TI4 376 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 OR51D1Q8NGF3 324 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 RAB40AQ8WXH6 277 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 RFT1Q96AA3 541 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 CEP19Q96LK0 163 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 ELL3Q9HB65 397 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-202ENST00000301935 GCM1Q9NP62 436 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 MYOZ1Q9NP98 299 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-202ENST00000301935 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
UBXN1-202ENST00000301935 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 PGA5P0DJD9 388 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 GTF2F2P13984 249 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 P2RY14Q15391 338 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A1Q86YD7 464 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 C11orf53Q8IXP5 236 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 POC1AQ8NBT0 407 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 OR5D18Q8NGL1 313 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
UBXN1-202ENST00000301935 C1orf123Q9NWV4 160 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 RNF7Q9UBF6 113 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 RABL2AQ9UBK7 228 aaPredicted RBP12.7□□□□□ -0.38
UBXN1-202ENST00000301935 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 RABL2BQ9UNT1 228 aa12.7□□□□□ -0.38
UBXN1-202ENST00000301935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■■□□ 17.7
UBXN1-202ENST00000301935 NBEAL1Q6ZS30 2694 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 A0A0A6YYH2 397 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 hCG_1807616A0A1W2PRN6 198 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 A6NJ64 397 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 TMEM14DPA8MWL7 114 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 AKR7A2O43488 359 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms