RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 EPHA1P21709 976 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 MMDQ15546 238 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 AGBL4Q5VU57 503 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 SLC35E3Q7Z769 313 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 ZNF514Q96K75 400 aaPredicted RBP12.66□□□□□ -0.38
CDT1-201ENST00000301019 LPAR5Q9H1C0 372 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 CCDC85CA6NKD9 419 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 ZNF850A8MQ14 1090 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 M0QZ24 198 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 HCRTR1O43613 425 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 TBPP20226 339 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 FPR2P25090 351 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 NKX2-1P43699 371 aaPredicted RBP12.66□□□□□ -0.38
CDT1-201ENST00000301019 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 FAM57BQ71RH2 274 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 ABHD12BQ7Z5M8 362 aaPredicted RBP12.66□□□□□ -0.38
CDT1-201ENST00000301019 BEND2Q8NDZ0 799 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 ZNF407Q9C0G0 2248 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 A8MVM7 634 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 SLC31A1O15431 190 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 IL11P20809 199 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 IL12BP29460 328 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 PRICKLE4Q2TBC4 344 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 DCAF10Q5QP82 559 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 KCTD18Q6PI47 426 aaPredicted RBP12.66□□□□□ -0.38
CDT1-201ENST00000301019 OR9A4Q8NGU2 314 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 ADAM19Q9H013 955 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 CALHM2Q9HA72 323 aa12.66□□□□□ -0.38
CDT1-201ENST00000301019 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 PRRT4C9JH25 899 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 HCRTR2O43614 444 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 IGHEP01854 428 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 LCATP04180 440 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 ZNF823P16415 610 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 TSPAN7P41732 249 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 FBXO42Q6P3S6 717 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 Q7L0L9 218 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 VN1R17PQ8TDU5 208 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 PATE1Q8WXA2 126 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 R3HDM4Q96D70 268 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 PATZ1Q9HBE1 687 aaKnown RBP12.65□□□□□ -0.38
CDT1-201ENST00000301019 POLR1DQ9Y2S0 133 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 NUP210Q8TEM1 1887 aaPredicted RBP12.65□□□□□ -0.38
CDT1-201ENST00000301019 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 K7N7A8 449 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 HIST1H1DP16402 221 aaKnown RBP12.65□□□□□ -0.38
CDT1-201ENST00000301019 ZNF20P17024 532 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 ARHGAP19Q14CB8 494 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 IQCJQ1A5X6 159 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 C1orf140Q5VVS0 124 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 FAM103A1Q9BTL3 118 aaKnown RBP12.65□□□□□ -0.38
CDT1-201ENST00000301019 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.65□□□□□ -0.38
CDT1-201ENST00000301019 MED29Q9NX70 200 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 GPR34Q9UPC5 381 aa12.65□□□□□ -0.38
CDT1-201ENST00000301019 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 PHF1O43189 567 aaPredicted RBP12.64□□□□□ -0.39
CDT1-201ENST00000301019 GAPDHP04406 335 aaKnown RBP12.64□□□□□ -0.39
CDT1-201ENST00000301019 IL15RAQ13261 267 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 CATSPERDQ86XM0 798 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 MS4A10Q96PG2 267 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 PCNX3Q9H6A9 2034 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 IGKV1D-43A0A0B4J1Z2 117 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 E5RGE8 158 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 EWSR1Q01844 656 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDT1-201ENST00000301019 ZNF154Q13106 437 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 TAF9Q16594 264 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 C22orf15Q8WYQ4 148 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 NSG2Q9Y328 171 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 SERINC4A6NH21 518 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 PLRG1O43660 514 aaKnown RBP12.64□□□□□ -0.39
CDT1-201ENST00000301019 DDAH2O95865 285 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 BRS3P32247 399 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 RAB7AP51149 207 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 SCAND1P57086 179 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 SGCGQ13326 291 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 TMEM18Q96B42 140 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 LIN37Q96GY3 246 aaPredicted RBP12.64□□□□□ -0.39
CDT1-201ENST00000301019 RTN4RQ9BZR6 473 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 VSIRQ9H7M9 311 aa12.64□□□□□ -0.39
CDT1-201ENST00000301019 HIDE1A8MVS5 230 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 GPR75O95800 540 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 TK1P04183 234 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 IGFBP3P17936 291 aaPredicted RBP12.63□□□□□ -0.39
CDT1-201ENST00000301019 CHRNB4P30926 498 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 CHRNA7P36544 502 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 PPP1CAP62136 330 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 AARDQ4LEZ3 155 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 DPPA3Q6W0C5 159 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 SLC22A24Q8N4F4 322 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 VPS25Q9BRG1 176 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 RSG1Q9BU20 258 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms