RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 IFITM2Q01629 132 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 SF3B4Q15427 424 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDH16-201ENST00000299752 OR10AD1Q8NGE0 317 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 IL36GQ9NZH8 169 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 VSIG4Q9Y279 399 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 CACNA1BQ00975 2339 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 UBE2QL1A1L167 161 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
CDH16-201ENST00000299752 TIMP3P35625 211 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 ARL6IP1Q15041 203 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 SEZ6L2Q6UXD5 910 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 EMG1Q92979 244 aaKnown RBP12.13□□□□□ -0.47
CDH16-201ENST00000299752 PAIP2BQ9ULR5 123 aaKnown RBP12.13□□□□□ -0.47
CDH16-201ENST00000299752 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
CDH16-201ENST00000299752 F8VVB4 439 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 F8VWA3 439 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 OR4E1P0C645 316 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 CECR9P0C854 216 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 CBR1P16152 277 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 BCL3P20749 454 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 OR5A2Q8NGI9 324 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 OR5P3Q8WZ94 311 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 DYRK2Q92630 601 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 SDCBPO00560 298 aaPredicted RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 IGKV3-15P01624 115 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 CHATP28329 748 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 UCP2P55851 309 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 TSPAN5P62079 268 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 ZSCAN4Q8NAM6 433 aaPredicted RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 OR5H2Q8NGV7 314 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 SULT4A1Q9BR01 284 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 M0R1B8 84 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 MPZP25189 248 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 RBM11P57052 281 aaKnown RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 NLRC3Q7RTR2 1065 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 SLC25A40Q8TBP6 338 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
CDH16-201ENST00000299752 ALX4Q9H161 411 aaPredicted RBP12.12□□□□□ -0.47
CDH16-201ENST00000299752 PLCE1Q9P212 2302 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 IGKV1D-8A0A087WSZ0 117 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 OR5H1A6NKK0 313 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 OR7C1O76099 320 aaPredicted RBP12.11□□□□□ -0.47
CDH16-201ENST00000299752 SELEP16581 610 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 OR3A3P47888 321 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 KLRB1Q12918 225 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 CDK10Q15131 360 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 C2orf68Q2NKX9 166 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 Q5BKY6 102 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 HAGHLQ6PII5 290 aaPredicted RBP12.11□□□□□ -0.47
CDH16-201ENST00000299752 FBXW12Q6X9E4 464 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 HYLS1Q96M11 299 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 HSF4Q9ULV5 492 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 MPC1Q9Y5U8 109 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 ZFYVE26Q68DK2 2539 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 MSTNO14793 375 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 AKR7A2O43488 359 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 SYNGR1O43759 233 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 GMFBP60983 142 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 P2RY6Q15077 328 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 ZMYND11Q15326 602 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 VAX1Q5SQQ9 334 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 SPICQ8N5J4 248 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 OR2T35Q8NGX2 323 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 MARCH1Q8TCQ1 289 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 ZNF431Q8TF32 576 aaPredicted RBP12.11□□□□□ -0.47
CDH16-201ENST00000299752 WDR89Q96FK6 387 aaPredicted RBP12.11□□□□□ -0.47
CDH16-201ENST00000299752 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
CDH16-201ENST00000299752 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 NPTNQ9Y639 398 aa12.11□□□□□ -0.47
CDH16-201ENST00000299752 IGHV1-18A0A0C4DH31 117 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 FAM221AA4D161 298 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 FAM172BPA6NC97 362 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 J3QW42 95 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 CA11O75493 328 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 CALCRP30988 508 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 OPRM1P35372 400 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 MPV17P39210 176 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 FABP6P51161 128 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 SNRPD2P62316 118 aaKnown RBP12.1□□□□□ -0.47
CDH16-201ENST00000299752 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 VHLLQ6RSH7 139 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 TERB2Q8NHR7 220 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 ZFAND1Q8TCF1 268 aa12.1□□□□□ -0.47
CDH16-201ENST00000299752 RANBP3Q9H6Z4 567 aaPredicted RBP12.1□□□□□ -0.47
CDH16-201ENST00000299752 EHFQ9NZC4 300 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms