RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TP53I11O14683 189 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 ATXN7O15265 892 aaPredicted RBP11.78□□□□□ -0.52
CTDP1-202ENST00000299543 GSTP1P09211 210 aaKnown RBP11.78□□□□□ -0.52
CTDP1-202ENST00000299543 UBE2V2Q15819 145 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 BATFQ16520 125 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 TAF9Q16594 264 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 Q6ZRG5 221 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 DOCK7Q96N67 2140 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 CHST5Q9GZS9 411 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 OPA3Q9H6K4 179 aa11.78□□□□□ -0.52
CTDP1-202ENST00000299543 C19orf25Q9UFG5 118 aaPredicted RBP11.78□□□□□ -0.52
CTDP1-202ENST00000299543 MUC3AQ02505 3323 aa11.77□□□□□ -0.52
CTDP1-202ENST00000299543 PPP1R2P9O14990 202 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
CTDP1-202ENST00000299543 FXYD4P59646 89 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 TDHQ8IZJ6 230 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 DOK5Q9P104 306 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 LSM5Q9Y4Y9 91 aaKnown RBP11.77□□□□□ -0.53
CTDP1-202ENST00000299543 A0A1W2PNV4 684 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 OR2C1O95371 312 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 SFT2D2O95562 160 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 CD37P11049 281 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 MTCP1P56278 107 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 CYCSP99999 105 aaKnown RBP11.77□□□□□ -0.53
CTDP1-202ENST00000299543 SP6Q3SY56 376 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 DTX1Q86Y01 620 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 C1orf147Q96MC9 270 aaPredicted RBP11.77□□□□□ -0.53
CTDP1-202ENST00000299543 DKKL1Q9UK85 242 aa11.77□□□□□ -0.53
CTDP1-202ENST00000299543 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 SOD3P08294 240 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 CCL3P10147 92 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 MSR1P21757 451 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 RBMXP38159 391 aaKnown RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 SLC35A1P78382 337 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 NKX6-1P78426 367 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 CARFQ8N187 725 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 DYRK2Q92630 601 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 ZNF2Q9BSG1 426 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 ULBP2Q9BZM5 246 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 CYTL1Q9NRR1 136 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 C14orf166Q9Y224 244 aaKnown RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 CBY1Q9Y3M2 126 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 SHANK1Q9Y566 2161 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 FRYQ5TBA9 3013 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 A0A087WZY1 265 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 TNFSF11O14788 317 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 JMJD7P0C870 316 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 RGS19P49795 217 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 SHBQ15464 509 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 GJC3Q8NFK1 279 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 BSCL2Q96G97 398 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 GPR179Q6PRD1 2367 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 ZNF850A8MQ14 1090 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 M0R135 149 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 HPNP05981 417 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 APLNRP35414 380 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 FAM180AQ6UWF9 173 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 ZNF799Q96GE5 643 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 FAAP24Q9BTP7 215 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 PNRC2Q9NPJ4 139 aaKnown RBP11.76□□□□□ -0.53
CTDP1-202ENST00000299543 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
CTDP1-202ENST00000299543 IGLV3-12A0A075B6K2 115 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 LCATP04180 440 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 TBPP20226 339 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 SULT1A1P50225 295 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 CAV2P51636 162 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 GRB2P62993 217 aaKnown RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 FAHD2BQ6P2I3 314 aaPredicted RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 CPNE4Q96A23 557 aaPredicted RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 FAHD2AQ96GK7 314 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 PECRQ9BY49 303 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 KCNJ16Q9NPI9 418 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 CPAMD8Q8IZJ3 1885 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 NPIPB13A6NJU9 1138 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 AQP7P3A6NL99 342 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 NPIPB4C9JG80 1138 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 CDCP2Q5VXM1 449 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 YRDCQ86U90 279 aaKnown RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 SPEM1Q8N4L4 309 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 SCGB3A2Q96PL1 93 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 MRPL37Q9BZE1 423 aaKnown RBP11.75□□□□□ -0.53
CTDP1-202ENST00000299543 LPAR3Q9UBY5 353 aa11.75□□□□□ -0.53
CTDP1-202ENST00000299543 IL17BQ9UHF5 180 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms