RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TMEM52Q8NDY8 209 aa13.71□□□□□ -0.22
FNDC1-201ENST00000297267 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 FAM3AP98173 230 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 ST8SIA1Q92185 356 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 UQCC2Q9BRT2 126 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 FAM78BQ5VT40 261 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 TBC1D26Q86UD7 250 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 WFDC3Q8IUB2 231 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 ABHD3Q8WU67 409 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 PECRQ9BY49 303 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 MRM2Q9UI43 246 aaKnown RBP13.7□□□□□ -0.22
FNDC1-201ENST00000297267 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 SPINT1O43278 529 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 IL5P05113 134 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 HIST1H3AP68431 136 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 CDC20Q12834 499 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 WDR88Q6ZMY6 472 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 ETV3LQ6ZN32 361 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 TRAV1-2A0A0B4J238 106 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 TUSC5Q8IXB3 177 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 PCOLCE2Q9UKZ9 415 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 SIPA1L3O60292 1781 aaPredicted RBP13.7□□□□□ -0.22
FNDC1-201ENST00000297267 IL10RAQ13651 578 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 MPV17LQ2QL34 196 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 SSMEM1Q8WWF3 244 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 NTNG2Q96CW9 530 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 P4HTMQ9NXG6 502 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 KLHDC2Q9Y2U9 406 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 LIPGQ9Y5X9 500 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 MYO7AQ13402 2215 aa13.7□□□□□ -0.22
FNDC1-201ENST00000297267 TMPRSS2O15393 492 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 ST8SIA5O15466 376 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 LMX1BO60663 402 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 MPPED2Q15777 294 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 COL13A1Q5TAT6 717 aaPredicted RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 SCPEP1Q9HB40 452 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 LSM2Q9Y333 95 aaKnown RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 HIST1H1DP16402 221 aaKnown RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 OR3A1P47881 315 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 GZMKP49863 264 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 TPRX1Q8N7U7 411 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 ZDHHC16Q969W1 377 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 WFDC6Q9BQY6 131 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 MOB1AQ9H8S9 216 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 CRXO43186 299 aaPredicted RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 PRR7Q8TB68 274 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 DHRS9Q9BPW9 319 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 RALYQ9UKM9 306 aaKnown RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 SLC17A2O00624 439 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 LIMS3P0CW19 117 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 LIMS4P0CW20 117 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 ETV6P41212 452 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 TMEM128Q5BJH2 165 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 HSD17B10Q99714 261 aaKnown RBP13.69□□□□□ -0.22
FNDC1-201ENST00000297267 GPA33Q99795 319 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 GABRG3Q99928 467 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 CYSLTR2Q9NS75 346 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 CA10Q9NS85 328 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 COL18A1P39060 1754 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 LAMB2P55268 1798 aa13.69□□□□□ -0.22
FNDC1-201ENST00000297267 CTSBP07858 339 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 PRB4P10163 310 aaPredicted RBP13.68□□□□□ -0.22
FNDC1-201ENST00000297267 SMUG1Q53HV7 270 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 SYS1Q8N2H4 156 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 ASB10Q8WXI3 467 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 ALG14Q96F25 216 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 UBTD1Q9HAC8 227 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 TRGV10A0A0A0MS01 117 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 TAAR5O14804 337 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 F5H697 171 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 TGOLN2O43493 480 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 GATCO43716 136 aaKnown RBP13.68□□□□□ -0.22
FNDC1-201ENST00000297267 COX5AP20674 150 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 PEBP1P30086 187 aaKnown RBP13.68□□□□□ -0.22
FNDC1-201ENST00000297267 CD200P41217 278 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 CCR5P51681 352 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 CT55Q8WUE5 264 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 IGHV1OR15-9A0A0B4J2B8 117 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 TRAPPC2P0DI81 140 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 TRAPPC2BP0DI82 140 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 WNT5AP41221 380 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 NOVA1P51513 510 aaKnown RBP13.68□□□□□ -0.22
FNDC1-201ENST00000297267 ASB13Q8WXK3 278 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 IL20Q9NYY1 176 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 CD160O95971 181 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 PPP1CBP62140 327 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 VN1R4Q7Z5H5 301 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 SOSTQ9BQB4 213 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 WDR13Q9H1Z4 485 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 ELF5Q9UKW6 265 aaPredicted RBP13.68□□□□□ -0.22
FNDC1-201ENST00000297267 C17orf51A8MQB3 221 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 SLC38A11Q08AI6 406 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 PRSS53Q2L4Q9 553 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 C4orf45Q96LM5 186 aa13.68□□□□□ -0.22
FNDC1-201ENST00000297267 OR2A5Q96R48 311 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms