RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 NDUFA13Q9P0J0 144 aa23.24■■□□□ 1.31
CHCHD4-201ENST00000295767 IL36RNQ9UBH0 155 aa23.24■■□□□ 1.31
CHCHD4-201ENST00000295767 DNAJB11Q9UBS4 358 aa23.24■■□□□ 1.31
CHCHD4-201ENST00000295767 CSMD1Q96PZ7 3565 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 A0A0B4J203 849 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 UBBP0CG47 229 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 ART1P52961 327 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 SMIM21Q3B7S5 101 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 FOXB2Q5VYV0 432 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 ELP2Q6IA86 826 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 FAM90A1Q86YD7 464 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 LIN7BQ9HAP6 207 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 RHOFQ9HBH0 211 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 HMG20AQ9NP66 347 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 NLKQ9UBE8 527 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 GHRLQ9UBU3 117 aa23.23■■□□□ 1.31
CHCHD4-201ENST00000295767 ISPDA4D126 451 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 VWC2LB2RUY7 222 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 ZNF701M0R085 212 aaPredicted RBP23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 BPNT1O95861 308 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 CSTBP04080 98 aaKnown RBP23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 ARSBP15848 533 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 PRKACAP17612 351 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 Q8NFD4 153 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 OR5T2Q8NGG2 359 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 FAM3DQ96BQ1 224 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 BARHL1Q9BZE3 327 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 TMEM165Q9HC07 324 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 CCDC168Q8NDH2 2452 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 ZNF780AO75290 641 aaPredicted RBP23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 FSTL3O95633 263 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 VSIG8P0DPA2 414 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 MUC1P15941 1255 aaPredicted RBP23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 GPR176Q14439 515 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 MICBQ29980 383 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 IDNKQ5T6J7 187 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 TMEM104Q8NE00 496 aa23.22■■□□□ 1.31
CHCHD4-201ENST00000295767 TRAV38-1A0A0B4J264 116 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 MDH2P40926 338 aaKnown RBP23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 SNU13P55769 128 aaKnown RBP23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 FGF12P61328 243 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 ZNF404Q494X3 552 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 SHEQ5VZ18 495 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 OR10K2Q6IF99 312 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 LRRC28Q86X40 367 aaPredicted RBP23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 CROCCP3Q8IVE0 287 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 FAM46BQ96A09 425 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 BANF2Q9H503 90 aa23.21■■□□□ 1.31
CHCHD4-201ENST00000295767 NR4A2P43354 598 aa23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 QRFPP83859 136 aa23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 C2orf76Q3KRA6 126 aa23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 TMEM246Q9BRR3 403 aa23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 NARFLQ9H6Q4 476 aa23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 SETXQ7Z333 2677 aaKnown RBP23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 NOTCH2Q04721 2471 aa23.2■■□□□ 1.3
CHCHD4-201ENST00000295767 A6NHS1 94 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 OR2AT4A6NND4 320 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 CRTAPO75718 401 aaPredicted RBP23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 GYPAP02724 150 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 TFF1P04155 84 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 PSG2P11465 335 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 BMXP51813 675 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 UNC119Q13432 240 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 STUMQ69YW2 141 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 OSR2Q8N2R0 312 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 CST11Q9H112 138 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 PCDHB16Q9NRJ7 776 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 ITGB1BP2Q9UKP3 347 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 IGKV1D-17A0A075B6S4 117 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 TMEM14DPA8MWL7 114 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 KNG1P01042 644 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 GTF2F2P13984 249 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 SNRPBP14678 240 aaKnown RBP23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 MGMTP16455 207 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 RORCP51449 518 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 PIGYQ3MUY2 71 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 FIP1L1Q6UN15 594 aaKnown RBP23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 MUC20Q8N307 709 aaPredicted RBP23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 OR51T1Q8NGJ9 327 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 DYNC2LI1Q8TCX1 351 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 DGCR14Q96DF8 476 aaKnown RBP23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 Q96MF0 132 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 OR14J1Q9UGF5 321 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 OR5V1Q9UGF6 321 aa23.19■■□□□ 1.3
CHCHD4-201ENST00000295767 RFPL4AA6NLU0 287 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 RFPL4AL1F8VTS6 287 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 DUSP1P28562 367 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 RANBP1P43487 201 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 CEBPDP49716 269 aaPredicted RBP23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 TMEM155Q4W5P6 130 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 ANGPTL6Q8NI99 470 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 KCNG3Q8TAE7 436 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 ZNF222Q9UK12 451 aa23.18■■□□□ 1.3
CHCHD4-201ENST00000295767 TMEM272A0A1B0GTI8 110 aa23.17■■□□□ 1.3
CHCHD4-201ENST00000295767 CYSRT1A8MQ03 144 aa23.17■■□□□ 1.3
CHCHD4-201ENST00000295767 LDLRAD4O15165 306 aa23.17■■□□□ 1.3
CHCHD4-201ENST00000295767 MPIG6BO95866 241 aa23.17■■□□□ 1.3
CHCHD4-201ENST00000295767 PAHP00439 452 aa23.17■■□□□ 1.3
CHCHD4-201ENST00000295767 SLC25A16P16260 332 aa23.17■■□□□ 1.3
CHCHD4-201ENST00000295767 AMY2BP19961 511 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms