RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TPRX1Q8N7U7 411 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 WFDC9Q8NEX5 89 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 OR5AU1Q8NGC0 362 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 RPS4Y2Q8TD47 263 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 MALSU1Q96EH3 234 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 APOL4Q9BPW4 351 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 NRIP2Q9BQI9 281 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 MUC13Q9H3R2 512 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 HES4Q9HCC6 221 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 ABCB10Q9NRK6 738 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 FAM53CQ9NYF3 392 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 ENPP5Q9UJA9 477 aa7.44□□□□□ -1.22
CNOT9-202ENST00000295701 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 hCG_1809904A0A1W2PP81 198 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 A0A1W2PPE2 198 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 A0A1W2PPH5 198 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 A0A1W2PR64 198 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 A0A1W2PRV1 198 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 TMEM82A0PJX8 343 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ACOD1A6NK06 481 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 SH2D7A6NKC9 451 aaPredicted RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 J3QT63 122 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 K7N7A8 449 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 PRODHO43272 600 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 NOS1APO75052 506 aaPredicted RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 PEX14O75381 377 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 SRSF10O75494 262 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 DHRS3O75911 302 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 CST1P01037 141 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ZNF728P0DKX0 622 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 IGHV1-8P0DP01 117 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 OSMP13725 252 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ATP6V1B1P15313 513 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 EDDM3BP56851 147 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ERVK11-1P61568 191 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ESRRGP62508 458 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 SLC34A1Q06495 639 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 TRIM25Q14258 630 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 SPATS1Q496A3 300 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 FAM98BQ52LJ0 330 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 SLC35D3Q5M8T2 416 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 CLVS2Q5SYC1 327 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 TMEM42Q69YG0 159 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 CCDC121Q6ZUS5 278 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ZNF573Q86YE8 665 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 ASCC1Q8N9N2 400 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 OR11H6Q8NGC7 330 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 OR13D1Q8NGV5 346 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 OR14K1Q8NGZ2 314 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 TRMT10AQ8TBZ6 339 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 CHID1Q9BWS9 393 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 MROQ9BYG7 248 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 YIPF3Q9GZM5 350 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 TVP23BQ9NYZ1 205 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 NUFIP1Q9UHK0 495 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 IKZF2Q9UKS7 526 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 GTF2A1LQ9UNN4 478 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 SLC22A13Q9Y226 551 aa7.43□□□□□ -1.22
CNOT9-202ENST00000295701 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
CNOT9-202ENST00000295701 DNAH7Q8WXX0 4024 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 IGKV1-27A0A075B6S5 117 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 FAM230AA0A1W2PPH8 454 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 DBX1A6NMT0 343 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 H3BS24 57 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 M0R129 80 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ZNF737O75373 536 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 HMGN1P05114 100 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 CALCBP10092 127 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 MPZP25189 248 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 HOXD3P31249 432 aaPredicted RBP7.42□□□□□ -1.22
CNOT9-202ENST00000295701 RIDAP52758 137 aaKnown RBP7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ACTA2P62736 377 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ACTG2P63267 376 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ACTC1P68032 377 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ACTA1P68133 377 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 EDDM3AQ14507 147 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ODF4Q2M2E3 257 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 KCTD18Q6PI47 426 aaPredicted RBP7.42□□□□□ -1.22
CNOT9-202ENST00000295701 DEGS2Q6QHC5 323 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 PIGWQ7Z7B1 504 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ZNF679Q8IYX0 411 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 ADGRG5Q8IZF4 528 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 DTX3Q8N9I9 347 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 OR52N4Q8NGI2 321 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 NDNFQ8TB73 568 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 SLAMF9Q96A28 289 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 FOXRED1Q96CU9 486 aaPredicted RBP7.42□□□□□ -1.22
CNOT9-202ENST00000295701 CHST6Q9GZX3 395 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 MED4Q9NPJ6 270 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 MTCH1Q9NZJ7 389 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 IL36RNQ9UBH0 155 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 OR52A1Q9UKL2 312 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 V9GYS6 101 aa7.42□□□□□ -1.22
CNOT9-202ENST00000295701 DYNC2H1Q8NCM8 4307 aaKnown RBP7.42□□□□□ -1.22
CNOT9-202ENST00000295701 TCRBV4S1A1TA0A5B7 111 aa7.41□□□□□ -1.22
CNOT9-202ENST00000295701 ARRDC5A6NEK1 342 aa7.41□□□□□ -1.22
CNOT9-202ENST00000295701 FAM90A22PA8MWA6 464 aa7.41□□□□□ -1.22
CNOT9-202ENST00000295701 F2RL2O00254 374 aa7.41□□□□□ -1.22
CNOT9-202ENST00000295701 DLGAP1O14490 977 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms