RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PIGMQ9H3S5 423 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 HEXA-AS1Q9H8Q6 139 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 LOC285556D6RIA3 1793 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 TMEM272A0A1B0GTI8 110 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 A0A1B0GUH1 482 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 KLRB1Q12918 225 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 CRIPAKQ8N1N5 446 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 DEFB108AA8MXU0 73 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 CYTIPO60759 359 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 KRASP01116 189 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 HNF1AP20823 631 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 UBE2G2P60604 165 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 GUCA2AQ02747 115 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 PCNPQ8WW12 178 aaKnown RBP15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 CACNA1EQ15878 2313 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 CLEC18AA5D8T8 446 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 J3QT63 122 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 H2AFB1P0C5Y9 115 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 ACOT6Q3I5F7 207 aaPredicted RBP15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 CLEC18CQ8NCF0 446 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 PXT1Q8NFP0 134 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 FBXW5Q969U6 566 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 SPSB2Q99619 263 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 NUDT19A8MXV4 375 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 CDIPTO14735 213 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 LY86O95711 162 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 MBP02144 154 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 HOXA6P31267 233 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 C6orf201Q7Z4U5 140 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 BAGE3Q86Y29 109 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 BAGE2Q86Y30 109 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 MRGPRDQ8TDS7 321 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR3A1P47881 315 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZNF770Q6IQ21 691 aaPredicted RBP15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 NDFIP1Q9BT67 221 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 CTSSP25774 331 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 NDUFA6P56556 154 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 SPICQ8N5J4 248 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 RNF133Q8WVZ7 376 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 FOXJ2Q9P0K8 574 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 LOC101059948A0A1B0GTJ6 334 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 ADAM10O14672 748 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 PRSS23O95084 383 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 CBR1P16152 277 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 RPL12P30050 165 aaKnown RBP15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 KIR2DS2P43631 304 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 PCOLCEQ15113 449 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 ACOT7LQ6ZUV0 252 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 ADTRPQ96IZ2 230 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 CNTD2Q9H8S5 307 aa15.59■□□□□ 0.09
CDC42EP3-201ENST00000295324 TRPM7Q96QT4 1865 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 MEX3AA1L020 520 aaKnown RBP15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 FCGR3BO75015 233 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 SMIM10L1P0DMW3 83 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 CSRP1P21291 193 aaKnown RBP15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 FPR2P25090 351 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 SMIM10Q96HG1 83 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 NIPSNAP3BQ9BS92 247 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZNF665Q9H7R5 613 aa15.58■□□□□ 0.09
CDC42EP3-201ENST00000295324 RP1P56715 2156 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 GABRB1P18505 474 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 TMUB2Q71RG4 321 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 OR5A2Q8NGI9 324 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 LURAP1Q96LR2 239 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 ACTR3CQ9C0K3 210 aaPredicted RBP15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 MAGT1Q9H0U3 335 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 OR5H14A6NHG9 310 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 PRSS44E7EML9 344 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 ATP6V1G2-DDX39BF2Z307 99 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 PRSS12P56730 875 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 Q3ZCU0 254 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 FAM27BQ5VT28 67 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 IL36GQ9NZH8 169 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 SPTBN2O15020 2390 aa15.58■□□□□ 0.08
CDC42EP3-201ENST00000295324 TMEM210A6NLX4 147 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 COX5AP20674 150 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 ZNF239Q16600 458 aaKnown RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 OR2T6Q8NHC8 308 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 YIPF5Q969M3 257 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 CA10Q9NS85 328 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 THYN1Q9P016 225 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 MYO16Q9Y6X6 1858 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 FLI1Q01543 452 aaPredicted RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 SLC26A10Q8NG04 563 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 DMKNQ6E0U4 476 aaPredicted RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 FKBP11Q9NYL4 201 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 CLN8Q9UBY8 286 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 BRCA1P38398 1863 aaKnown RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 PCM1Q15154 2024 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 UPK3AO75631 287 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 DXOO77932 396 aaKnown RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 IL5P05113 134 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 GZMHP20718 246 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 GPR6P46095 362 aaPredicted RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 DIRC2Q96SL1 478 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 OCEL1Q9H607 264 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 FLVCR2Q9UPI3 526 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 CDCP2Q5VXM1 449 aa15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 OPN3Q9H1Y3 402 aaPredicted RBP15.57■□□□□ 0.08
CDC42EP3-201ENST00000295324 TREM2Q9NZC2 230 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms