RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 OR10C1Q96KK4 312 aa17.27■□□□□ 0.35
CXCL16-201ENST00000293778 C2orf50Q96LR7 162 aa17.27■□□□□ 0.35
CXCL16-201ENST00000293778 DUX4Q9UBX2 424 aa17.27■□□□□ 0.35
CXCL16-201ENST00000293778 BDP1A6H8Y1 2624 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 ZSCAN5BA6NJL1 495 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 ZNHIT1O43257 154 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 COX5BP10606 129 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 CD79AP11912 226 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 M6PRP20645 277 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 HSD17B13Q7Z5P4 300 aaPredicted RBP17.26■□□□□ 0.35
CXCL16-201ENST00000293778 LINC00052Q96N35 136 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 REPIN1Q9BWE0 567 aaKnown RBP17.26■□□□□ 0.35
CXCL16-201ENST00000293778 PAPOLGQ9BWT3 736 aaKnown RBP17.26■□□□□ 0.35
CXCL16-201ENST00000293778 DECR2Q9NUI1 292 aa17.26■□□□□ 0.35
CXCL16-201ENST00000293778 TEX13DA0A0J9YY54 714 aaPredicted RBP17.25■□□□□ 0.35
CXCL16-201ENST00000293778 ZNF503-AS2A6NEH8 195 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 A8MXK9 166 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 PDCD6O75340 191 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 FGF2P09038 288 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 RBMXP38159 391 aaKnown RBP17.25■□□□□ 0.35
CXCL16-201ENST00000293778 RBM11P57052 281 aaKnown RBP17.25■□□□□ 0.35
CXCL16-201ENST00000293778 MALLQ13021 153 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 SLC25A26Q70HW3 274 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 PRELID1Q9Y255 219 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 FAM221AA4D161 298 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 ACTL6AO96019 429 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 HOXB5P09067 269 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 CD46P15529 392 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 NUP62P37198 522 aaPredicted RBP17.25■□□□□ 0.35
CXCL16-201ENST00000293778 SLC10A1Q14973 349 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 ATP1A1-AS1Q5TC04 95 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 PRSS54Q6PEW0 395 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 SGPP2Q8IWX5 399 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 POC1AQ8NBT0 407 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 BVESQ8NE79 360 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 RRNAD1Q96FB5 475 aaKnown RBP17.25■□□□□ 0.35
CXCL16-201ENST00000293778 DHRS9Q9BPW9 319 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 LIME1Q9H400 295 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 C1orf123Q9NWV4 160 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 LIPGQ9Y5X9 500 aa17.25■□□□□ 0.35
CXCL16-201ENST00000293778 DHRS11Q6UWP2 260 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 UNQ6126/PRO20091Q6UXV3 157 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 MRPL21Q7Z2W9 205 aaKnown RBP17.24■□□□□ 0.35
CXCL16-201ENST00000293778 NUFIP2Q7Z417 695 aaKnown RBP17.24■□□□□ 0.35
CXCL16-201ENST00000293778 APOBEC3DQ96AK3 386 aaPredicted RBP17.24■□□□□ 0.35
CXCL16-201ENST00000293778 ACKR4Q9NPB9 350 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 LYL1P12980 280 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 ARR3P36575 388 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 RAB1AP62820 205 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 PRDX4Q13162 271 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 SNTB1Q13884 538 aaKnown RBP17.24■□□□□ 0.35
CXCL16-201ENST00000293778 PDCD1Q15116 288 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.24■□□□□ 0.35
CXCL16-201ENST00000293778 ZFP62Q8NB50 900 aaPredicted RBP17.24■□□□□ 0.35
CXCL16-201ENST00000293778 BHLHE23Q8NDY6 225 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 PIK3IP1Q96FE7 263 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 OR5AC2Q9NZP5 309 aa17.24■□□□□ 0.35
CXCL16-201ENST00000293778 FREM1Q5H8C1 2179 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 MED13Q9UHV7 2174 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 PQLC2LA1A4F0 135 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 CRYM-AS1A6NIL9 109 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 KRBOX1C9JBD0 128 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 PAN3Q58A45 887 aaKnown RBP17.23■□□□□ 0.35
CXCL16-201ENST00000293778 SLC22A25Q6T423 547 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 EIF4E3Q8N5X7 224 aaKnown RBP17.23■□□□□ 0.35
CXCL16-201ENST00000293778 ZNF286AQ9HBT8 521 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 GSKIPQ9P0R6 139 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 ARGFXA6NJG6 315 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 LGALS8O00214 317 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 FUT3P21217 361 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 NPBWR2P48146 333 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 RAB32Q13637 225 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 BATF2Q8N1L9 274 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 TOMM40LQ969M1 308 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 MARS2Q96GW9 593 aaKnown RBP17.23■□□□□ 0.35
CXCL16-201ENST00000293778 DEFB127Q9H1M4 99 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 ZNF442Q9H7R0 627 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 C12orf4Q9NQ89 552 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 MEMO1Q9Y316 297 aa17.23■□□□□ 0.35
CXCL16-201ENST00000293778 KNTC1P50748 2209 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 F8VVB4 439 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 F8VWA3 439 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 OR7C1O76099 320 aaPredicted RBP17.22■□□□□ 0.35
CXCL16-201ENST00000293778 PET100P0DJ07 73 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 ZNF728P0DKX0 622 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 IL15RAQ13261 267 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 RBM39Q14498 530 aaKnown RBP17.22■□□□□ 0.35
CXCL16-201ENST00000293778 TRIP6Q15654 476 aaKnown RBP17.22■□□□□ 0.35
CXCL16-201ENST00000293778 STOML3Q8TAV4 291 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 LDAHQ9H6V9 325 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 CRIM1Q9NZV1 1036 aa17.22■□□□□ 0.35
CXCL16-201ENST00000293778 ZNF205O95201 554 aa17.21■□□□□ 0.35
CXCL16-201ENST00000293778 PLP2Q04941 152 aa17.21■□□□□ 0.35
CXCL16-201ENST00000293778 SPEM2Q0P670 501 aa17.21■□□□□ 0.35
CXCL16-201ENST00000293778 POM121Q96HA1 1249 aa17.21■□□□□ 0.35
CXCL16-201ENST00000293778 POM121L2Q96KW2 1035 aa17.21■□□□□ 0.35
CXCL16-201ENST00000293778 BARX1Q9HBU1 254 aaPredicted RBP17.21■□□□□ 0.35
CXCL16-201ENST00000293778 STARD10Q9Y365 291 aa17.21■□□□□ 0.35
CXCL16-201ENST00000293778 TPT1P13693 172 aaKnown RBP17.21■□□□□ 0.35
CXCL16-201ENST00000293778 PIGPP57054 158 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms