RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SSX2Q16385 188 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 AADACL4Q5VUY2 407 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 C12orf73Q69YU5 71 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 SSX6Q7RTT6 188 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 DYNAPQ8N1N2 210 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 PIFOQ8TCI5 191 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 EMG1Q92979 244 aaKnown RBP10.32□□□□□ -0.76
CD44-203ENST00000278386 BORCS8Q96FH0 119 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 ZNF714Q96N38 554 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 ADI1Q9BV57 179 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 PITPNC1Q9UKF7 332 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 FAM90A8PA6NJQ4 464 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 VGLL3A8MV65 326 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 G3V2T6 193 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 RBP4P02753 201 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 IGHV1-8P0DP01 117 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 CCL1P22362 96 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 GABRR1P24046 479 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 EPHA2P29317 976 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 ERVK11-1P61568 191 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 SAMD5Q5TGI4 173 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 ZNF626Q68DY1 528 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 FAM220AQ7Z4H9 259 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 CATSPERDQ86XM0 798 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 OR8H2Q8N162 312 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 ZNF676Q8N7Q3 588 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 OR10H4Q8NGA5 316 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 NDNFQ8TB73 568 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 UTP4Q969X6 686 aaKnown RBP10.31□□□□□ -0.76
CD44-203ENST00000278386 OR5M11Q96RB7 305 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 CHST5Q9GZS9 411 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 ENOPH1Q9UHY7 261 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 DNAH3Q8TD57 4116 aa10.31□□□□□ -0.76
CD44-203ENST00000278386 KIAA2026Q5HYC2 2103 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 IGKV1-27A0A075B6S5 117 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 LOC107986453A0A1B0GWG9 222 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 A0A1W2PQL4 384 aaPredicted RBP10.3□□□□□ -0.76
CD44-203ENST00000278386 F8VVB4 439 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 F8VWA3 439 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ZNF737O75373 536 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 HAND1O96004 215 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 CD28P10747 220 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ATP6V1E1P36543 226 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 VDAC2P45880 294 aaPredicted RBP10.3□□□□□ -0.76
CD44-203ENST00000278386 POU3F4P49335 361 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 FUT6P51993 359 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 SNU13P55769 128 aaKnown RBP10.3□□□□□ -0.76
CD44-203ENST00000278386 OR12D2P58182 307 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ACTA2P62736 377 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ACTG2P63267 376 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ACTC1P68032 377 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ACTA1P68133 377 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 SLC34A1Q06495 639 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 UBE2V2Q15819 145 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 GRK1Q15835 563 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 ATP6AP1Q15904 470 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 CCBE1Q6UXH8 406 aaPredicted RBP10.3□□□□□ -0.76
CD44-203ENST00000278386 Q6ZSR3 168 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 SLC25A26Q70HW3 274 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 TRAPPC6BQ86SZ2 158 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 TPRX1Q8N7U7 411 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 BCAS4Q8TDM0 211 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 SLC7A6OSQ96CW6 309 aaPredicted RBP10.3□□□□□ -0.76
CD44-203ENST00000278386 R3HDM4Q96D70 268 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 MALSU1Q96EH3 234 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 SNX22Q96L94 193 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 CDCA4Q9BXL8 241 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 PRSS22Q9GZN4 317 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 CHST6Q9GZX3 395 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 GABARAPL1Q9H0R8 117 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 MTCH1Q9NZJ7 389 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 WARS2Q9UGM6 360 aaKnown RBP10.3□□□□□ -0.76
CD44-203ENST00000278386 HILPDAQ9Y5L2 63 aa10.3□□□□□ -0.76
CD44-203ENST00000278386 hADV38S2A0JD32 116 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 MEGF11A6BM72 1044 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 A6NDX4 124 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 METTL15A6NJ78 407 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 PIN1P1O15428 100 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 XPNPEP2O43895 674 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 CYB5AP00167 134 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 SERPINA3P01011 423 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 IGHA1P01876 353 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 OR2T7P0C7T2 308 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 UBCP0CG48 685 aaKnown RBP10.29□□□□□ -0.76
CD44-203ENST00000278386 PRKACAP17612 351 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 PEX2P28328 305 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 HTR1FP30939 366 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
CD44-203ENST00000278386 TMEM95Q3KNT9 176 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 KDM4DQ6B0I6 523 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 TCF23Q7RTU1 214 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 ZDHHC13Q8IUH4 622 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 EGFL6Q8IUX8 553 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 Q8IYB0 196 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 OR4F17Q8NGA8 305 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 OR11H6Q8NGC7 330 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 OR4F4Q96R69 305 aa10.29□□□□□ -0.76
CD44-203ENST00000278386 MMP28Q9H239 520 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms