RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 GPR173Q9NS66 373 aa16.28■□□□□ 0.2
SSC4D-201ENST00000275560 TREM2Q9NZC2 230 aa16.28■□□□□ 0.2
SSC4D-201ENST00000275560 KLRF1Q9NZS2 232 aa16.28■□□□□ 0.2
SSC4D-201ENST00000275560 CCL1P22362 96 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 FASLGP48023 281 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 C17orf67Q0P5P2 114 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 KIAA0895LQ68EN5 471 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 KDF1Q8NAX2 398 aaPredicted RBP16.27■□□□□ 0.2
SSC4D-201ENST00000275560 ZNF160Q9HCG1 818 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 PARPBPQ9NWS1 579 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 GAR1Q9NY12 217 aaKnown RBP16.27■□□□□ 0.2
SSC4D-201ENST00000275560 CELSR3Q9NYQ7 3312 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 A0A1B0GV90 55 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 SOD3P08294 240 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 ARL4DP49703 201 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 OR1D5P58170 312 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 RND3P61587 244 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 DLX2Q07687 328 aaPredicted RBP16.27■□□□□ 0.2
SSC4D-201ENST00000275560 TMEM176BQ3YBM2 270 aaPredicted RBP16.27■□□□□ 0.2
SSC4D-201ENST00000275560 OR2G3Q8NGZ4 309 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 POC1BQ8TC44 478 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 ZNF700Q9H0M5 742 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 KCNIP3Q9Y2W7 256 aa16.27■□□□□ 0.2
SSC4D-201ENST00000275560 JMJD7P0C870 316 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 ELOBQ15370 118 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 SLC25A47Q6Q0C1 308 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 Q6ZS52 159 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 P4HA3Q7Z4N8 544 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 C1QL4Q86Z23 238 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 MAGT1Q9H0U3 335 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 PRO1933Q9H354 126 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 SLC2A9Q9NRM0 540 aa16.27■□□□□ 0.19
SSC4D-201ENST00000275560 RBFOX3A6NFN3 312 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 PHF1O43189 567 aaPredicted RBP16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HEXBP07686 556 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 RGS19P49795 217 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 UBE2KP61086 200 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 EWSR1Q01844 656 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSC4D-201ENST00000275560 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 PRDM13Q9H4Q3 707 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 VPS13AQ96RL7 3174 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 COL5A1P20908 1838 aaPredicted RBP16.26■□□□□ 0.19
SSC4D-201ENST00000275560 NPIPB13A6NJU9 1138 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 NPIPB4C9JG80 1138 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BKO60814 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 TRGC2P03986 189 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BJP06899 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BOP23527 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 ATP6V0CP27449 155 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BBP33778 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 BLKP51451 505 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BDP58876 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BCP62807 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 DLK1P80370 383 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST2H2BEQ16778 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.26■□□□□ 0.19
SSC4D-201ENST00000275560 SPSB3Q6PJ21 355 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 CYB561D1Q8N8Q1 229 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 CCDC54Q8NEL0 328 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 OR2AE1Q8NHA4 323 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BHQ93079 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BNQ99877 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 HIST1H2BMQ99879 126 aa16.26■□□□□ 0.19
SSC4D-201ENST00000275560 FAM230AA0A1W2PPH8 454 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 CYB5BO43169 146 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 PNLIPP16233 465 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 RAB1AP62820 205 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 RUNX1Q01196 453 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 C4orf17Q53FE4 359 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 S100PBPQ96BU1 408 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 MEGF10Q96KG7 1140 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 TM2D1Q9BX74 207 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 TPSD1Q9BZJ3 242 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 STRAPQ9Y3F4 350 aaKnown RBP16.25■□□□□ 0.19
SSC4D-201ENST00000275560 EML6Q6ZMW3 1958 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 HSD17B6O14756 317 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 AFF3P51826 1226 aaKnown RBP16.25■□□□□ 0.19
SSC4D-201ENST00000275560 SUCLG1P53597 346 aaKnown RBP16.25■□□□□ 0.19
SSC4D-201ENST00000275560 GAMTQ14353 236 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 SLC35G3Q8N808 338 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 ZNF610Q8N9Z0 462 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 TMEM171Q8WVE6 324 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 C14orf144Q96I85 54 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 SDK2Q58EX2 2172 aa16.25■□□□□ 0.19
SSC4D-201ENST00000275560 EXPH5Q8NEV8 1989 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 A0A1W2PNV4 684 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 IGSF23A1L1A6 192 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 ST8SIA3O43173 380 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 ZNF41P51814 821 aaPredicted RBP16.24■□□□□ 0.19
SSC4D-201ENST00000275560 PHYHD1Q5SRE7 291 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 SLC22A25Q6T423 547 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 LIAT1Q6ZQX7 453 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 MSI2Q96DH6 328 aaKnown RBP16.24■□□□□ 0.19
SSC4D-201ENST00000275560 C18orf12Q96KH6 178 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 Q96M66 194 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 TP53RKQ96S44 253 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 PPP4R1LQ9P1A2 415 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
SSC4D-201ENST00000275560 ZNF724A8MTY0 619 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms