RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 FOXB2Q5VYV0 432 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 hADV38S2A0JD32 116 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR5AC1P0C628 307 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 FA2HQ7L5A8 372 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 MYPOPQ86VE0 399 aaPredicted RBP10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR5D13Q8NGL4 314 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR10AC1Q8NH08 325 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 UCK1Q9HA47 277 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 UQCC1Q9NVA1 299 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 FLRT3Q9NZU0 649 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 STRCQ7RTU9 1775 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 CCL3P10147 92 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR8B3Q8NGG8 313 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR8B2Q96RD0 313 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 DCAF16Q9NXF7 216 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 SCN1AP35498 2009 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 TRIM77I1YAP6 450 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 FGF2P09038 288 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 FBP1P09467 338 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 IGFBP7Q16270 282 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 SMIM4Q8WVI0 70 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 RAB1CQ92928 201 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 ZNF586Q9NXT0 402 aa10.52□□□□□ -0.72
SHPRH-201ENST00000275233 TMEFF2Q9UIK5 374 aaPredicted RBP10.52□□□□□ -0.72
SHPRH-201ENST00000275233 MRPS18BQ9Y676 258 aaKnown RBP10.52□□□□□ -0.72
SHPRH-201ENST00000275233 F2RL2O00254 374 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 OXA1LQ15070 435 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 CD226Q15762 336 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 RHBDD2Q6NTF9 364 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 RNASEKQ6P5S7 137 aaKnown RBP10.52□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF574Q6ZN55 896 aaPredicted RBP10.52□□□□□ -0.73
SHPRH-201ENST00000275233 COMMD1Q8N668 190 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 ZBTB44Q8NCP5 570 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 VSTM2LQ96N03 204 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 RAB18Q9NP72 206 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 MS4A18H0YCH9 400 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 TPPP2P59282 170 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 TIAL1Q01085 375 aaKnown RBP eCLIP10.52□□□□□ -0.73
SHPRH-201ENST00000275233 MS4A18Q3C1V0 323 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF425Q6IV72 752 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 COX14Q96I36 57 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 SEBOXQ9HB31 216 aaPredicted RBP10.52□□□□□ -0.73
SHPRH-201ENST00000275233 OR2M5A3KFT3 312 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 CCL21O00585 134 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 CDC42EP2O14613 210 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 ACSM4P0C7M7 580 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 TSPO2Q5TGU0 170 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 UCN2Q96RP3 112 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 RHOFQ9HBH0 211 aa10.52□□□□□ -0.73
SHPRH-201ENST00000275233 NHSL1Q5SYE7 1610 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-201ENST00000275233 IGHA1P01876 353 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 IGHA2P01877 340 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 PPP1R1AQ13522 171 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF429Q86V71 674 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 SAP30LQ9HAJ7 183 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-201ENST00000275233 TINAGQ9UJW2 476 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 TRAPPC1Q9Y5R8 145 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 A0A1W2PNV4 684 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 SPINT1O43278 529 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 SFTA3P0C7M3 94 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 JMJD6Q6NYC1 403 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CCDC190Q86UF4 302 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 C17orf47Q8NEP4 570 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CHRDL1Q9BU40 450 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 IGHV3-21A0A0B4J1V1 117 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 LY86O95711 162 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 G0S2P27469 103 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 RAB7AP51149 207 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 PJVKQ0ZLH3 352 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 KIAA0040Q15053 153 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-201ENST00000275233 MCM3APO60318 1980 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 TRAV39A0A0B4J263 110 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CDIPTO14735 213 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF275Q9NSD4 429 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-201ENST00000275233 OR5V1Q9UGF6 321 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CTAG2O75638 210 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 LGALS7P47929 136 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 CACNA1CQ13936 2221 aa10.51□□□□□ -0.73
SHPRH-201ENST00000275233 TRAV38-1A0A0B4J264 116 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 ACTL6AO96019 429 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 TUSC1Q2TAM9 212 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 SIRT3Q9NTG7 399 aaPredicted RBP10.5□□□□□ -0.73
SHPRH-201ENST00000275233 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 ETV3LQ6ZN32 361 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 MSRB3Q8IXL7 192 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 PIK3IP1Q96FE7 263 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 UQCC2Q9BRT2 126 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 PECRQ9BY49 303 aa10.5□□□□□ -0.73
SHPRH-201ENST00000275233 WDR61Q9GZS3 305 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms