RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TRA2AQ13595 282 aaKnown RBP eCLIP11.27□□□□□ -0.61
HERC6-202ENST00000273960 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 CST9LP1Q5W188 147 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 WDFY1Q8IWB7 410 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 PIGTQ969N2 578 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 C5orf34Q96MH7 638 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.61
HERC6-202ENST00000273960 FAM60AQ9NP50 221 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 PPIAL4AQ9Y536 164 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 OBSL1O75147 1896 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 NSG1A0A0A6YYJ2 146 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 GPR137BO60478 399 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 BGLAPP02818 100 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 PNMTP11086 282 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 HSD11B1P28845 292 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 FOXL2P58012 376 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
HERC6-202ENST00000273960 COL10A1Q03692 680 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 GPR157Q5UAW9 335 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 RTL6Q6ICC9 239 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 OR2AJ1Q8NGZ0 328 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 SCGB3A2Q96PL1 93 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 NXF5Q9H1B4 397 aaKnown RBP11.27□□□□□ -0.61
HERC6-202ENST00000273960 VPS13AQ96RL7 3174 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 CACNA1EQ15878 2313 aa11.27□□□□□ -0.61
HERC6-202ENST00000273960 CXorf51AA0A1B0GTR3 108 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 H3BML4 177 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 SSSCA1O60232 199 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 TTRP02766 147 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 DBHP09172 617 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 RPS2P15880 293 aaKnown RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 P2RY1P47900 373 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 POU3F1Q03052 451 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 DBX2Q6ZNG2 339 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 FAM57BQ71RH2 274 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 M1APQ8TC57 530 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 THAP3Q8WTV1 239 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 BMFQ96LC9 184 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 TIMM29Q9BSF4 260 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 PBOV1Q9GZY1 135 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 AURKAIP1Q9NWT8 199 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 SDK2Q58EX2 2172 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 TLCD2A6NGC4 264 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 PHF1O43189 567 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 PLRG1O43660 514 aaKnown RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 TCF21O43680 179 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 UTS2O95399 124 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 PRTGQ2VWP7 1150 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 TEX38Q6PEX7 206 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 MYPOPQ86VE0 399 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 RSC1A1Q92681 617 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 GPX7Q96SL4 187 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 E5RGE8 158 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 BCAT2O15382 392 aaPredicted RBP11.26□□□□□ -0.61
HERC6-202ENST00000273960 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 SLC35E2P0CK97 266 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 ARL4DP49703 201 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 PAX5Q02548 391 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 YPEL4Q96NS1 127 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 METTL9Q9H1A3 318 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 GPR84Q9NQS5 396 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 PRTFDC1Q9NRG1 225 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 NSG2Q9Y328 171 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 KIAA1549LQ6ZVL6 1849 aa11.26□□□□□ -0.61
HERC6-202ENST00000273960 C2CD4DB7Z1M9 353 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 ANGPTL7O43827 346 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 IL18BPO95998 194 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 PNLIPP16233 465 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 CLDN17P56750 224 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 SLC22A25Q6T423 547 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 C16orf47Q6ZP98 133 aaPredicted RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 TSTD1Q8NFU3 115 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 LMX1AQ8TE12 382 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 SLC37A2Q8TED4 501 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 THRSPQ92748 146 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 EMG1Q92979 244 aaKnown RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 MMABQ96EY8 250 aaPredicted RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 PLEKHJ1Q9NW61 149 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 SLC17A4Q9Y2C5 497 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 ZNF407Q9C0G0 2248 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 IGLV1-36A0A0B4J1U3 117 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 MARCH11A6NNE9 402 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 TGOLN2O43493 480 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 BPNT1O95861 308 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 TNFP01375 233 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 IL12BP29460 328 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 GLIPR1P48060 266 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms