RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 ANXA10Q9UJ72 324 aa14.43□□□□□ -0.1
VPS54-201ENST00000272322 FIGNL2A6NMB9 653 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 NTN3O00634 580 aaPredicted RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 SYNGR3O43761 229 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 NR2C1P13056 603 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 CCL1P22362 96 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 DUSP3P51452 185 aaPredicted RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 B3GALT5-AS1P59052 145 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 MRPS34P82930 218 aaKnown RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 ZNF273Q14593 569 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 C10orf128Q5T292 105 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 GGNBP1Q5YKI7 109 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 DHRS13Q6UX07 377 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 OR52H1Q8NGJ2 320 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 WNT5BQ9H1J7 359 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 BARX1Q9HBU1 254 aaPredicted RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 SPTA1P02549 2419 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 A0A087WZY1 265 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 HAAOP46952 286 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 PLGLB1Q02325 96 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 C6orf15Q6UXA7 325 aaPredicted RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 HSD17B13Q7Z5P4 300 aaPredicted RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 OR56B2PQ8NGI1 322 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 SECTM1Q8WVN6 248 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 RTN4IP1Q8WWV3 396 aaPredicted RBP14.42□□□□□ -0.1
VPS54-201ENST00000272322 MARVELD3Q96A59 401 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 MAGT1Q9H0U3 335 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 IL17BQ9UHF5 180 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 ADAMTS20P59510 1910 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 DBX1A6NMT0 343 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 ZNF716A6NP11 495 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 TSPAN9O75954 239 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 TGIF1Q15583 401 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 TSC22D1Q15714 1073 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 KCNMB1Q16558 191 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 ETV3LQ6ZN32 361 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 ZNF611Q8N823 705 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 SGCZQ96LD1 299 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 Q96M66 194 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 TLNRD1Q9H1K6 362 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 V9GYS6 101 aa14.42□□□□□ -0.1
VPS54-201ENST00000272322 A0A0U1RQV5 110 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 PHF1O43189 567 aaPredicted RBP14.41□□□□□ -0.1
VPS54-201ENST00000272322 NFYBP25208 207 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 HOXA4Q00056 320 aaPredicted RBP14.41□□□□□ -0.1
VPS54-201ENST00000272322 HNF4GQ14541 408 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 TMPRSS7Q7RTY8 843 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 FAM89BQ8N5H3 189 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 HSD17B11Q8NBQ5 300 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 C2orf50Q96LR7 162 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 OR2H1Q9GZK4 316 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 DEFB127Q9H1M4 99 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 HS3ST1O14792 307 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 SRD5A2P31213 254 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 FAM3AP98173 230 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 PNLIPRP3Q17RR3 467 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 C17orf78Q8N4C9 275 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 ESRP2Q9H6T0 727 aaKnown RBP14.41□□□□□ -0.1
VPS54-201ENST00000272322 GPR35Q9HC97 309 aa14.41□□□□□ -0.1
VPS54-201ENST00000272322 MYOZ1Q9NP98 299 aaPredicted RBP14.41□□□□□ -0.1
VPS54-201ENST00000272322 ZNF107Q9UII5 783 aaPredicted RBP14.41□□□□□ -0.1
VPS54-201ENST00000272322 A0A1B0GW55 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 K7EPK0 472 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4L2P0CJ85 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4L3P0CJ86 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4L4P0CJ87 422 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4L5P0CJ88 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4L6P0CJ89 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4L7P0CJ90 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 ZNF728P0DKX0 622 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 SELEP16581 610 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 CALCRP30988 508 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 AKR1D1P51857 326 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 ZNF616Q08AN1 781 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 PUSL1Q8N0Z8 303 aaKnown RBP14.4□□□□□ -0.1
VPS54-201ENST00000272322 FAM71E2Q8N5Q1 922 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 FAM117AQ9C073 453 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 TAF9BQ9HBM6 251 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 CYTL1Q9NRR1 136 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 DUX4Q9UBX2 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 SLC7A11Q9UPY5 501 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 TIMM10BQ9Y5J6 103 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 ZNF503-AS2A6NEH8 195 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 TUBAL3A6NHL2 446 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 SERPINE3A8MV23 424 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 RPS2P15880 293 aaKnown RBP14.4□□□□□ -0.1
VPS54-201ENST00000272322 TBPP20226 339 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 CYCSP99999 105 aaKnown RBP14.4□□□□□ -0.1
VPS54-201ENST00000272322 RAB35Q15286 201 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 ABHD17BQ5VST6 288 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 ERGIC1Q969X5 290 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 SAV1Q9H4B6 383 aaPredicted RBP14.4□□□□□ -0.1
VPS54-201ENST00000272322 RPL12P30050 165 aaKnown RBP14.4□□□□□ -0.1
VPS54-201ENST00000272322 CD80P33681 288 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 CEBPGP53567 150 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 NSUN5P2Q63ZY6 315 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 H3F3CQ6NXT2 135 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 FAM180AQ6UWF9 173 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 OSR2Q8N2R0 312 aa14.4□□□□□ -0.1
VPS54-201ENST00000272322 RDH5Q92781 318 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms