RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 PDZK1IP1Q13113 114 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 CEACAM21Q3KPI0 293 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 FBXW12Q6X9E4 464 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 TRAPPC6BQ86SZ2 158 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 MUC20Q8N307 709 aaPredicted RBP17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 BHLHE23Q8NDY6 225 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 PXT1Q8NFP0 134 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 HPSE2Q8WWQ2 592 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 ZNF629Q9UEG4 869 aaPredicted RBP17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 ZNF835Q9Y2P0 537 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 PQLC2LA1A4F0 135 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 ANKRD30BLA7E2S9 258 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 FOXI3A8MTJ6 420 aaPredicted RBP17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 CSTBP04080 98 aaKnown RBP17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 CD3DP04234 171 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 ZP3P21754 424 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 CPT2P23786 658 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 OR4D10Q8NGI6 311 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 NUDCD2Q8WVJ2 157 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 CCDC120Q96HB5 630 aa17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 FGF23Q9GZV9 251 aaPredicted RBP17.66■□□□□ 0.42
LYSMD2-201ENST00000267838 IGKV1-12A0A0C4DH73 117 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 H3BUI4 141 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 ARPC5O15511 151 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 IGKV1D-12P01611 117 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 ZNF250P15622 560 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 UCP2P55851 309 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 H2BFSP57053 126 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 C4orf46Q504U0 113 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 OR2T2Q6IF00 324 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 TMEM65Q6PI78 240 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 C11orf88Q6PI97 169 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 OR8S1Q8NH09 359 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 DVL3Q92997 716 aaPredicted RBP17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 ARHGAP5-AS1Q96IT6 56 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 Q96M66 194 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 OR2J1Q9GZK6 312 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 IL36GQ9NZH8 169 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 TINAGQ9UJW2 476 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 KCNK7Q9Y2U2 307 aa17.65■□□□□ 0.42
LYSMD2-201ENST00000267838 BOD1L1Q8NFC6 3051 aa17.64■□□□□ 0.42
LYSMD2-201ENST00000267838 MFNGO00587 321 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 RAB3DO95716 219 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 CYB5AP00167 134 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 IGLV1-44P01699 117 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 CECR9P0C854 216 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 RPA2P15927 270 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 BLVRBP30043 206 aaPredicted RBP17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 OPRM1P35372 400 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 PNLIPRP3Q17RR3 467 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 CALHM1Q8IU99 346 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 PCNPQ8WW12 178 aaKnown RBP17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 HIST1H2AAQ96QV6 131 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 PFDN2Q9UHV9 154 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 MPC1Q9Y5U8 109 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 SLC25A15Q9Y619 301 aa17.64■□□□□ 0.41
LYSMD2-201ENST00000267838 FXYD6-FXYD2A0A087WZ82 144 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 MSTNO14793 375 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 SSX5O60225 188 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 LILRA1O75019 489 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 GPM6AP51674 278 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 ERVS71-1P61550 626 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 GSG1LQ6UXU4 331 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 ZNF611Q8N823 705 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 FAM169BQ8N8A8 192 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 ZSCAN4Q8NAM6 433 aaPredicted RBP17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 OR5A2Q8NGI9 324 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 OR1J1Q8NGS3 322 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 OR51F2Q8NH61 342 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 SLC25A40Q8TBP6 338 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 ARL6Q9H0F7 186 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 FXYD6Q9H0Q3 95 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 SDHAF2Q9NX18 166 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 LOC105371267A0A1B0GV96 52 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 TMEM82A0PJX8 343 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 MFSD2BA6NFX1 497 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 LPCAT3Q6P1A2 487 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 OR5P3Q8WZ94 311 aa17.63■□□□□ 0.41
LYSMD2-201ENST00000267838 CHD8Q9HCK8 2581 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 IGHV1-18A0A0C4DH31 117 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 A0A0G2JNJ9 132 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 A0A1B0GW55 424 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 ZNF736B4DX44 427 aaPredicted RBP17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 ZNF732B4DXR9 585 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 SIX6O95475 246 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 DUX4L2P0CJ85 424 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 DUX4L3P0CJ86 424 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 DUX4L4P0CJ87 422 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 DUX4L5P0CJ88 424 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 DUX4L6P0CJ89 424 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 DUX4L7P0CJ90 424 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 RAC2P15153 192 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 BMP5P22003 454 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 GABRR1P24046 479 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 RBPJQ06330 500 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 FGL1Q08830 312 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 MEF2DQ14814 521 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 TIMM23BQ5SRD1 257 aa17.62■□□□□ 0.41
LYSMD2-201ENST00000267838 RGS7BPQ6MZT1 257 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms