RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ZNF205O95201 554 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 SPDEFO95238 335 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 OR4E1P0C645 316 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 ADRA2CP18825 462 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 LUMP51884 338 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 PIGYQ3MUY2 71 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 DTX1Q86Y01 620 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 FAM185AQ8N0U4 392 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 ZIC4Q8N9L1 334 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 DMBX1Q8NFW5 382 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 S100PBPQ96BU1 408 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 SFXN3Q9BWM7 321 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 PECRQ9BY49 303 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 H7C2Y5 167 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 WISP1O95388 367 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF436Q9C0F3 470 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 RNF150Q9ULK6 438 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 ADAMTS9Q9P2N4 1935 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 hCG_1809904A0A1W2PP81 198 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A1W2PPE2 198 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A1W2PR64 198 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A1W2PRV1 198 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 RPS27AP62979 156 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 LGI3Q8N145 548 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 OR52B4Q8NGK2 314 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 RGP1Q92546 391 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF524Q96C55 264 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 ZMYND11Q15326 602 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 C17orf78Q8N4C9 275 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 TMEM104Q8NE00 496 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF488Q96MN9 340 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 J3QT63 122 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 TOR1AO14656 332 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 TNFSF12O43508 249 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 IFNA17P01571 189 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 KCNMB1Q16558 191 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 C6orf183Q5T699 404 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 MOGAT3Q86VF5 341 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 ARL11Q969Q4 196 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 MUC22E2RYF6 1773 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 TMEM30CPA0ZSE6 113 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 MSMO1Q15800 293 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 SOX7Q9BT81 388 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 PLEKHF2Q9H8W4 249 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 RDH8Q9NYR8 311 aa12.55□□□□□ -0.4
PDLIM2-201ENST00000265810 MSTNO14793 375 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 CRHP06850 196 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 SRPXP78539 464 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 FAM27E3Q08E93 113 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 FAM57AQ8TBR7 257 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PRDM14Q9GZV8 571 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 KIF25Q9UIL4 384 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 ENSAO43768 121 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 LANCL1O43813 399 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 COX5BP10606 129 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PRAMEF6Q5VXH4 476 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 GALMQ96C23 342 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PRELID3BQ9Y3B1 194 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 MPDZO75970 2070 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A087WV48 116 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PIGPP57054 158 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 FAM3AP98173 230 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 KCNJ8Q15842 424 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 OR2B11Q5JQS5 317 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 ADAM5Q6NVV9 412 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 LILRB2Q8N423 598 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PPP1R3EQ9H7J1 279 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 GFOD1Q9NXC2 390 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 BRCA2P51587 3418 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 ANKRD20A5PA0PJZ0 165 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 TBR1Q16650 682 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 WDR13Q9H1Z4 485 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PIGMQ9H3S5 423 aa12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-201ENST00000265810 PHF3Q92576 2039 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 J3QRE1 110 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 NDUFB6O95139 128 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 ADRB1P08588 477 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 H3F3AP84243 136 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 IFITM3Q01628 133 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 UBE2V2Q15819 145 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 HFEQ30201 348 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 CEACAM21Q3KPI0 293 aa12.53□□□□□ -0.4
PDLIM2-201ENST00000265810 GLYATL2Q8WU03 294 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms