RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GBGT1Q8N5D6 347 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 THRSPQ92748 146 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 FAM122AQ96E09 287 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 ZNF514Q96K75 400 aaPredicted RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 NIPSNAP3BQ9BS92 247 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 STARD5Q9NSY2 213 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 ADAM29Q9UKF5 820 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 DHDHQ9UQ10 334 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 PI4KAP42356 2102 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CELSR3Q9NYQ7 3312 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 SOCS1O15524 211 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TNFSF12O43508 249 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TRAPPC6AO75865 159 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CHRNB4P30926 498 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TNFRSF4P43489 277 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 RABIFP47224 123 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 P2RY1P47900 373 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CCR4P51679 360 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 ZNF66Q6ZN08 573 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 DPY19L2P2Q6ZN68 376 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 COX15Q7KZN9 410 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 KMT5CQ86Y97 462 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 STPG4Q8N801 248 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 OR52N4Q8NGI2 321 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 HAS2Q92819 552 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TBX15Q96SF7 602 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CDX2Q99626 313 aaPredicted RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 GAL3ST2Q9H3Q3 398 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 FKBP11Q9NYL4 201 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 RNF24Q9Y225 148 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 MRPS28Q9Y2Q9 187 aaKnown RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 DMDP11532 3685 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ITGB1BP1O14713 200 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 PLRG1O43660 514 aaKnown RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 DBIP07108 87 aaKnown RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 RND2P52198 227 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 HLA-DRB3P79483 266 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ODF1Q14990 250 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 FAM90A2PQ658T7 463 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 LINC00114Q6XXX2 140 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 RAB42Q8N4Z0 105 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ADAMTS18Q8TE60 1221 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 PELI2Q9HAT8 420 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 LRIT1Q9P2V4 623 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 RP1P56715 2156 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 CACNA1HO95180 2353 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 RTTNQ86VV8 2226 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 A0A1B0GU03 582 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 CYB5R3P00387 301 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 IGKV1D-16P01601 117 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 DBHP09172 617 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 CD46P15529 392 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ALDH3B1P43353 468 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 TAS2R31P59538 309 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 QRFPP83859 136 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 RUNX1Q01196 453 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 TLE4Q04727 773 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 MMDQ15546 238 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 MLF2Q15773 248 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 LPAL2Q16609 132 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 PHF7Q9BWX1 381 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZNF703Q9H7S9 590 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZNF107Q9UII5 783 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZNF780BQ9Y6R6 833 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 A0A1B0GW64 132 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 CBY3A6NI87 242 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 CHRM2P08172 466 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 CT62P0C5K7 136 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 OR5AC1P0C628 307 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 PET100P0DJ07 73 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 HNRNPA2B1P22626 353 aaKnown RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 BTN3A2P78410 334 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZP2Q05996 745 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 DPTQ07507 201 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ARHGAP19Q14CB8 494 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 IQCJQ1A5X6 159 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 SP5Q6BEB4 398 aaPredicted RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 SLC25A26Q70HW3 274 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 NUFIP2Q7Z417 695 aaKnown RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 ERASQ7Z444 233 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 OR52M1Q8NGK5 317 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.69□□□□□ -1.187e-11■■■■■ 38.1
VAPB-201ENST00000265619 DNAJB12Q9NXW2 375 aaKnown RBP7.69□□□□□ -1.18
VAPB-201ENST00000265619 NAGKQ9UJ70 344 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 LAMP3Q9UQV4 416 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 FUT9Q9Y231 359 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 ZFP30Q9Y2G7 519 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 PAM16Q9Y3D7 125 aa7.69□□□□□ -1.18
VAPB-201ENST00000265619 IGKV1D-42A0A075B6H8 117 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 IGKV1D-8A0A087WSZ0 117 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 NKX6-3A6NJ46 265 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 SLC33A1O00400 549 aaPredicted RBP7.68□□□□□ -1.18
VAPB-201ENST00000265619 MPZL1O95297 269 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 CXCR1P25024 350 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms