RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ARFRP1Q13795 201 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
NUP54-201ENST00000264883 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 C1orf140Q5VVS0 124 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 ZNF573Q86YE8 665 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 CSNK2A3Q8NEV1 391 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 OR10A7Q8NGE5 316 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 POC1BQ8TC44 478 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 CABLES2Q9BTV7 478 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 FAM60AQ9NP50 221 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 G6PC2Q9NQR9 355 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 AK3Q9UIJ7 227 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 VAX2Q9UIW0 290 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 SLC5A6Q9Y289 635 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 HS3ST3A1Q9Y663 406 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 DHRS7CA6NNS2 312 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 C10orf142B7Z368 130 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 MPIG6BO95866 241 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 GP1BBP13224 206 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
NUP54-201ENST00000264883 CLN3Q13286 438 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 NKAIN1Q4KMZ8 207 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 SLC25A26Q70HW3 274 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 PRSS58Q8IYP2 241 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 HAS2Q92819 552 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 CYYR1Q96J86 154 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 HIST1H2AAQ96QV6 131 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 RFNGQ9Y644 331 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 NSG1A0A0A6YYJ2 146 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 C17orf105B2RV13 164 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 C11orf98E9PRG8 122 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 DIRAS3O95661 229 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 CYB5R3P00387 301 aaPredicted RBP11.5□□□□□ -0.57
NUP54-201ENST00000264883 CST2P09228 141 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 ZNF823P16415 610 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 NOVA1P51513 510 aaKnown RBP11.5□□□□□ -0.57
NUP54-201ENST00000264883 POLR2HP52434 150 aaKnown RBP11.5□□□□□ -0.57
NUP54-201ENST00000264883 TAS2R46P59540 309 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 TAF9Q16594 264 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 DEFB110Q30KQ9 67 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 COA6Q5JTJ3 125 aaKnown RBP11.5□□□□□ -0.57
NUP54-201ENST00000264883 SAPCD1Q5SSQ6 148 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 C1orf194Q5T5A4 169 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 C1orf189Q5VU69 101 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 NCR3LG1Q68D85 454 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 C9orf40Q8IXQ3 194 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 FAM185AQ8N0U4 392 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 SLC37A2Q8TED4 501 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 SPOCK3Q9BQ16 436 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 SEMA5BQ9P283 1151 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 LRP4O75096 1905 aa11.5□□□□□ -0.57
NUP54-201ENST00000264883 LOC101059948A0A1B0GTJ6 334 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 H0YIG0 161 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 HCRTR1O43613 425 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 GABRG2P18507 467 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 ASCL1P50553 236 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 SNU13P55769 128 aaKnown RBP11.49□□□□□ -0.57
NUP54-201ENST00000264883 SLC37A1P57057 533 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 SSPNQ14714 243 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 ZNF880Q6PDB4 577 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 BTNL3Q6UXE8 466 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
NUP54-201ENST00000264883 NOXO1Q8NFA2 376 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 MAFAQ8NHW3 353 aaPredicted RBP11.49□□□□□ -0.57
NUP54-201ENST00000264883 GAL3ST4Q96RP7 486 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 A0A1B0GU03 582 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 FAM230AA0A1W2PPH8 454 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 HCRTR2O43614 444 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 NPIPB7O75200 414 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 AHSA1O95433 338 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 OPN1MWP04001 364 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 OPN1MW2P0DN77 364 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 OPN1MW3P0DN78 364 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 FGF5P12034 268 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 CTLA4P16410 223 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 ALDH3B1P43353 468 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 TMEM50BP56557 158 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 RPL23AP62750 156 aaKnown RBP11.49□□□□□ -0.57
NUP54-201ENST00000264883 FOXF1Q12946 379 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 SULF2Q8IWU5 870 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 FAM160A2Q8N612 972 aaPredicted RBP11.49□□□□□ -0.57
NUP54-201ENST00000264883 DNASE2BQ8WZ79 361 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 ARHGAP5-AS1Q96IT6 56 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 SRD5A3Q9H8P0 318 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 GPR173Q9NS66 373 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 PADI1Q9ULC6 663 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
NUP54-201ENST00000264883 NPIPB13A6NJU9 1138 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 METTL12A8MUP2 240 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 NPIPB4C9JG80 1138 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 CRTAPO75718 401 aaPredicted RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 PNRC1Q12796 327 aaPredicted RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 GLIPR1L1Q6UWM5 242 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 ZNF705AQ6ZN79 300 aaPredicted RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 ZNF248Q8NDW4 579 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 STT3BQ8TCJ2 826 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms