RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 DTD1Q8TEA8 209 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 PECRQ9BY49 303 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 KIAA1456Q9P272 454 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 POLR2AP24928 1970 aaKnown RBP13.35□□□□□ -0.27
CASC3-201ENST00000264645 C3orf85A0A1B0GTC6 90 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 CLEC18AA5D8T8 446 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 TLCD2A6NGC4 264 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 UBE2CO00762 179 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 SPINK4O60575 86 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 EDN3P14138 238 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 TAS2R60P59551 318 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 PLAC9Q5JTB6 97 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 LIAT1Q6ZQX7 453 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 AAED1Q7RTV5 226 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 CLEC18CQ8NCF0 446 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 PP6455Q8WZ26 134 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 HEYLQ9NQ87 328 aaPredicted RBP13.35□□□□□ -0.27
CASC3-201ENST00000264645 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 RARRES3Q9UL19 164 aa13.35□□□□□ -0.27
CASC3-201ENST00000264645 B4DEV8 164 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 IGKV1D-16P01601 117 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 PLGLB1Q02325 96 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 DPPA3Q6W0C5 159 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 ZNF100Q8IYN0 542 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 OSR2Q8N2R0 312 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 TAAR9Q96RI9 348 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 HDHD3Q9BSH5 251 aaPredicted RBP13.34□□□□□ -0.27
CASC3-201ENST00000264645 SH3BGRL3Q9H299 93 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 SLC2A9Q9NRM0 540 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 SRPK3Q9UPE1 567 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 COX5AP20674 150 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 PPP1CAP62136 330 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 CATR1Q13166 79 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 OR13G1Q8NGZ3 307 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 MCHR2Q969V1 340 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
CASC3-201ENST00000264645 AHCTF1Q8WYP5 2266 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 LINC01387J3KSC0 135 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 PGA3P0DJD8 388 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 FOXF1Q12946 379 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 LBHQ53QV2 105 aaPredicted RBP13.34□□□□□ -0.27
CASC3-201ENST00000264645 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 WDR25Q64LD2 544 aaPredicted RBP13.34□□□□□ -0.27
CASC3-201ENST00000264645 OR10P1Q8NGE3 313 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 TBX15Q96SF7 602 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 SARGQ9BW04 601 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 SLC2A8Q9NY64 477 aa13.34□□□□□ -0.27
CASC3-201ENST00000264645 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.27
CASC3-201ENST00000264645 CHST1O43916 411 aa13.33□□□□□ -0.27
CASC3-201ENST00000264645 SYNGR4O95473 234 aa13.33□□□□□ -0.27
CASC3-201ENST00000264645 CCKARP32238 428 aa13.33□□□□□ -0.27
CASC3-201ENST00000264645 SHBQ15464 509 aa13.33□□□□□ -0.27
CASC3-201ENST00000264645 DMBX1Q8NFW5 382 aa13.33□□□□□ -0.27
CASC3-201ENST00000264645 AURKAIP1Q9NWT8 199 aaPredicted RBP13.33□□□□□ -0.27
CASC3-201ENST00000264645 LHX6Q9UPM6 363 aa13.33□□□□□ -0.27
CASC3-201ENST00000264645 NYNRINQ9P2P1 1898 aaKnown RBP13.33□□□□□ -0.28
CASC3-201ENST00000264645 P04436 131 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 NDUFB7P17568 137 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 HOXA5P20719 270 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 RND3P61587 244 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 OR8B12Q8NGG6 310 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 UBALD1Q8TB05 177 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 WFIKKN1Q96NZ8 548 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 Q9N2K0 584 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 FAM60AQ9NP50 221 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 FGF21Q9NSA1 209 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 NKX2-6A6NCS4 301 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 PLPP3O14495 311 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 DEDDO75618 318 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 KLHDC1Q8N7A1 406 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 OR2AE1Q8NHA4 323 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 PINX1Q96BK5 328 aaKnown RBP13.33□□□□□ -0.28
CASC3-201ENST00000264645 FAM234AQ9H0X4 552 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
CASC3-201ENST00000264645 A0A1W2PPE3 182 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 PCBD1P61457 104 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 INSM1Q01101 510 aaPredicted RBP13.32□□□□□ -0.28
CASC3-201ENST00000264645 CMTM2Q8TAZ6 248 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 ERGIC1Q969X5 290 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 PTX4Q96A99 478 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 ADGRG7Q96K78 797 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 IGHV3-64DA0A0J9YX35 117 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 FRG2CA6NGY1 282 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 RNF212BA8MTL3 300 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 CYR61O00622 381 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 ABHD16AO95870 558 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 OTX2P32243 289 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 FABP6P51161 128 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 VAX1Q5SQQ9 334 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 ZNF808Q8N4W9 903 aaPredicted RBP13.32□□□□□ -0.28
CASC3-201ENST00000264645 ST8SIA1Q92185 356 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 TECTBQ96PL2 329 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 M0QZK8 103 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
CASC3-201ENST00000264645 EML2O95834 649 aa13.32□□□□□ -0.28
CASC3-201ENST00000264645 MBPP02686 304 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms