RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TSC22D2O75157 780 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 IGLV3-1P01715 115 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 TTRP02766 147 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 UCHL1P09936 223 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 SNRPBP14678 240 aaKnown RBP14.15□□□□□ -0.15
SDCBP-201ENST00000260130 DGCR2P98153 550 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 TMEM249Q2WGJ8 235 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 RPL22L1Q6P5R6 122 aaKnown RBP14.15□□□□□ -0.15
SDCBP-201ENST00000260130 BTN2A1Q7KYR7 527 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 FAM220AQ7Z4H9 259 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 ELMOD2Q8IZ81 293 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 SPERTQ8NA61 448 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 OR13C5Q8NGS8 318 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 PHYHIPQ92561 330 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 GPR84Q9NQS5 396 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 TMEM106BQ9NUM4 274 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 MRPS7Q9Y2R9 242 aaKnown RBP14.15□□□□□ -0.15
SDCBP-201ENST00000260130 RHBDD3Q9Y3P4 386 aa14.15□□□□□ -0.15
SDCBP-201ENST00000260130 IGHV3-64DA0A0J9YX35 117 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 ZNF879B4DU55 563 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 H2AFB2P0C5Z0 115 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 ACKR3P25106 362 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 CD200P41217 278 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 ESCO2Q56NI9 601 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 UBE2NLQ5JXB2 153 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 COMMD2Q86X83 199 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 RAB1CQ92928 201 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 PELI1Q96FA3 418 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 TIMD4Q96H15 378 aa14.14□□□□□ -0.15
SDCBP-201ENST00000260130 LRP5LA4QPB2 252 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 GATA4P43694 442 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 CATSPERDQ86XM0 798 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 ZNF671Q8TAW3 534 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 ELF5Q9UKW6 265 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 WIPI2Q9Y4P8 454 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 MTORP42345 2549 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 TRBV2A0A0J9YWF9 115 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 TMEM127O75204 238 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 GNALP38405 381 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 RNASE12Q5GAN4 147 aaKnown RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 CEP78Q5JTW2 689 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 AVPI1Q5T686 147 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 PEG10Q86TG7 708 aaKnown RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 CCDC28AQ8IWP9 274 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 OR56B4Q8NH76 319 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 SMIM4Q8WVI0 70 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 DVL3Q92997 716 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 FAM71F1Q96KD3 344 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 PAPOLGQ9BWT3 736 aaKnown RBP14.13□□□□□ -0.15
SDCBP-201ENST00000260130 DCAF16Q9NXF7 216 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 SLC22A13Q9Y226 551 aa14.13□□□□□ -0.15
SDCBP-201ENST00000260130 IFNL4K9M1U5 179 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 PDCD5O14737 125 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 CRYZL1O95825 349 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 CST4P01036 141 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 HEXAP06865 529 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 KRTAP1-1Q07627 177 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 MZT1Q08AG7 82 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 RIPPLY1Q0D2K3 151 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 KLF9Q13886 244 aaPredicted RBP14.12□□□□□ -0.15
SDCBP-201ENST00000260130 TEX261Q6UWH6 196 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 MOGAT3Q86VF5 341 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 SEMA6DQ8NFY4 1073 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 OR8S1Q8NH09 359 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 ERGIC1Q969X5 290 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 MPC1Q9Y5U8 109 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 U3KQ87 197 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 LOC100289279A0A1B0GTE1 492 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 A0A1W2PPK0 400 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 WNT9BO14905 357 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 MTRF1O75570 445 aaKnown RBP14.12□□□□□ -0.15
SDCBP-201ENST00000260130 SLC22A5O76082 557 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 PTBP3O95758 552 aaKnown RBP14.12□□□□□ -0.15
SDCBP-201ENST00000260130 RBMXP38159 391 aaKnown RBP14.12□□□□□ -0.15
SDCBP-201ENST00000260130 PSMB10P40306 273 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 CCR6P51684 374 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 PLPP7Q8NBV4 271 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 GIMAP1Q8WWP7 306 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 DACT3Q96B18 629 aaPredicted RBP14.12□□□□□ -0.15
SDCBP-201ENST00000260130 NARFLQ9H6Q4 476 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 AK6Q9Y3D8 172 aaKnown RBP14.12□□□□□ -0.15
SDCBP-201ENST00000260130 NPTNQ9Y639 398 aa14.12□□□□□ -0.15
SDCBP-201ENST00000260130 CR1P17927 2039 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 MEIKINA0A087WXM9 373 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 A0A0B4J203 849 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 A0A1B0GTI1 187 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 LEUTXA8MZ59 168 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 P2RY10O00398 339 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 DHRS3O75911 302 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 SULT1A3P0DMM9 295 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 SULT1A4P0DMN0 295 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 RPS11P62280 158 aaKnown RBP eCLIP14.11□□□□□ -0.15
SDCBP-201ENST00000260130 IKZF1Q13422 519 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 MPPED2Q15777 294 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 PRAMEF6Q5VXH4 476 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 UNQ9370/PRO34162Q6UXP9 181 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 Q71RC1 249 aaPredicted RBP14.11□□□□□ -0.15
SDCBP-201ENST00000260130 PRSS35Q8N3Z0 413 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 CLDND2Q8NHS1 167 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms