RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 DNM1P46Q6ZS02 220 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 TMEM200AQ86VY9 491 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 KCNS2Q9ULS6 477 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 BORCS7-ASMTA0A0B4J1R7 106 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 FBXO24O75426 580 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 ABLIM2Q6H8Q1 611 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 CMTM1Q8IZ96 169 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 FIGNL2A6NMB9 653 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 ZNF705EA8MWA4 302 aaPredicted RBP13.66□□□□□ -0.22
RFX1-201ENST00000254325 NEURL1O76050 574 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 FAM3AP98173 230 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 KCNRGQ8N5I3 272 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 SLC25A32Q9H2D1 315 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 HEXA-AS1Q9H8Q6 139 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 MYOZ1Q9NP98 299 aaPredicted RBP13.66□□□□□ -0.22
RFX1-201ENST00000254325 KRBOX1C9JBD0 128 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 B3GALNT1O75752 331 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 HIKESHIQ53FT3 197 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 TMED6Q8WW62 240 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 MRPS24Q96EL2 167 aaKnown RBP13.66□□□□□ -0.22
RFX1-201ENST00000254325 C5orf66Q9H5L9 145 aa13.66□□□□□ -0.22
RFX1-201ENST00000254325 DHRS7CA6NNS2 312 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 KCNAB3O43448 404 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 ACTL6AO96019 429 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 OR2T2Q6IF00 324 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 ARL11Q969Q4 196 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 OBP2BQ9NPH6 170 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 FGFBP3Q8TAT2 258 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 Q96M66 194 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 TSNAXQ99598 290 aaKnown RBP13.65□□□□□ -0.22
RFX1-201ENST00000254325 REV3LO60673 3130 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 NUPL2O15504 423 aaKnown RBP13.65□□□□□ -0.22
RFX1-201ENST00000254325 CAV2P51636 162 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 RAB32Q13637 225 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 LGI3Q8N145 548 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 NUP50Q9UKX7 468 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 TNFSF18Q9UNG2 199 aa13.65□□□□□ -0.22
RFX1-201ENST00000254325 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
RFX1-201ENST00000254325 DEFB109BQ30KR1 87 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 ZNF528Q3MIS6 628 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 OR5M9Q8NGP3 310 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 SULT4A1Q9BR01 284 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 WDR13Q9H1Z4 485 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 SH2D2AQ9NP31 389 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 ZFP57Q9NU63 452 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 GVINP1Q7Z2Y8 2422 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
RFX1-201ENST00000254325 ZNF573Q86YE8 665 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 OR14J1Q9UGF5 321 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 MRPS18CQ9Y3D5 142 aaKnown RBP13.64□□□□□ -0.23
RFX1-201ENST00000254325 EML5Q05BV3 1969 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 ZNF806P0C7X5 589 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 PMP22Q01453 160 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 BTN1A1Q13410 526 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 ANGPTL6Q8NI99 470 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 STARD10Q9Y365 291 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 DOCK7Q96N67 2140 aa13.64□□□□□ -0.23
RFX1-201ENST00000254325 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 CD300LBA8K4G0 201 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 CRYGSP22914 178 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 RBM39Q14498 530 aaKnown RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 SURF2Q15527 256 aaPredicted RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 LY6G6FQ5SQ64 297 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 BAP18Q8IXM2 172 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 SLC30A7Q8NEW0 376 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 HRH4Q9H3N8 390 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 AGPAT2O15120 278 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 SOX8P57073 446 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 ZNF529Q6P280 563 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 DPPA2Q7Z7J5 298 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 STOML3Q8TAV4 291 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 LRP3O75074 770 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 RBMXL2O75526 392 aaKnown RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 GRPP07492 148 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 CA6P23280 308 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 LHX2P50458 406 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 ZNF660Q6AZW8 331 aaPredicted RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 TMEM65Q6PI78 240 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 SPIN2AQ99865 258 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 SPIN2BQ9BPZ2 258 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 SPACA1Q9HBV2 294 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 NCOA6Q14686 2063 aaPredicted RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 KIR2DS1A0A191URI9 304 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 NMBP08949 121 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 KIR2DS4P43632 304 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 KIR2DS1Q14954 304 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 RPUSD3Q6P087 351 aaKnown RBP13.63□□□□□ -0.23
RFX1-201ENST00000254325 OR10AD1Q8NGE0 317 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 RNF141Q8WVD5 230 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 TMEM45BQ96B21 275 aa13.63□□□□□ -0.23
RFX1-201ENST00000254325 DEGS1O15121 323 aa13.62□□□□□ -0.23
RFX1-201ENST00000254325 NXPH2O95156 264 aa13.62□□□□□ -0.23
RFX1-201ENST00000254325 CTSDP07339 412 aaPredicted RBP13.62□□□□□ -0.23
RFX1-201ENST00000254325 SLC25A4P12235 298 aa13.62□□□□□ -0.23
RFX1-201ENST00000254325 BCL3P20749 454 aa13.62□□□□□ -0.23
RFX1-201ENST00000254325 EPHA1P21709 976 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms