RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SGPP2Q8IWX5 399 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 TMED6Q8WW62 240 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 SPSB4Q96A44 273 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 ASF1BQ9NVP2 202 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 NECAP2Q9NVZ3 263 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 IL36GQ9NZH8 169 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 SLC7A11Q9UPY5 501 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 TSPAN4O14817 238 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 XRCC2O43543 280 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 FOXG1P55316 489 aaPredicted RBP16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 ARF1P84077 181 aaKnown RBP16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 DAZAP2Q15038 168 aaPredicted RBP16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 DHRS11Q6UWP2 260 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 Q6ZPA2 131 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 PRDM14Q9GZV8 571 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 BCO1Q9HAY6 547 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 ARID1AO14497 2285 aa16.89■□□□□ 0.29
CDC42EP1-201ENST00000249014 A0A096LPE4 126 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 A0A1W2PPZ6 126 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 FAM166BA8MTA8 275 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 MAGEA5P43359 124 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 AIMP2Q13155 320 aaKnown RBP16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 IAH1Q2TAA2 248 aaPredicted RBP16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 ABHD17BQ5VST6 288 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 COLCA1Q6ZS62 124 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 FOXRED2Q8IWF2 684 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 TUSC5Q8IXB3 177 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 BATF2Q8N1L9 274 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 SLC5A7Q9GZV3 580 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 PIGMQ9H3S5 423 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 LDAHQ9H6V9 325 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 TMEM100Q9NV29 134 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 PLA2G3Q9NZ20 509 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 GLS2Q9UI32 602 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 LINC01387J3KSC0 135 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 PIGPP57054 158 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 NRN1LQ496H8 165 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF585AQ6P3V2 769 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 TOMM40LQ969M1 308 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 MARC2Q969Z3 335 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 SLC6A15Q9H2J7 730 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 MED13Q9UHV7 2174 aa16.88■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF407Q9C0G0 2248 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 BET1O15155 118 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 PET100P0DJ07 73 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 CCL2P13500 99 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 ARHGDIBP52566 201 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 SPEM2Q0P670 501 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 OR1C1Q15619 314 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 SLC22A25Q6T423 547 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 MRPL24Q96A35 216 aaKnown RBP16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 TTTY12Q9BZ98 90 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 CALHM2Q9HA72 323 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 DNAJB11Q9UBS4 358 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF503-AS2A6NEH8 195 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF708P17019 499 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 NPBWR2P48146 333 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 RBM11P57052 281 aaKnown RBP16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 STK11Q15831 433 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 DCAF10Q5QP82 559 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF611Q8N823 705 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 LINC00470Q9BZP3 86 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 CRIM1Q9NZV1 1036 aa16.87■□□□□ 0.29
CDC42EP1-201ENST00000249014 DNAJC13O75165 2243 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 NUPL2O15504 423 aaKnown RBP16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 HLA-HP01893 362 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 FAM157CP0CG43 387 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 CD79AP11912 226 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 CCNOP22674 350 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 ITGA3P26006 1051 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 SP6Q3SY56 376 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 GGNBP1Q5YKI7 109 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 SLC25A26Q70HW3 274 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 SPERTQ8NA61 448 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 FNDC9Q8TBE3 224 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 CNTNAP3BQ96NU0 1288 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 CNTNAP3Q9BZ76 1288 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 OR2S2Q9NQN1 319 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 B4GALT7Q9UBV7 327 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 MEMO1Q9Y316 297 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 SHANK1Q9Y566 2161 aa16.86■□□□□ 0.29
CDC42EP1-201ENST00000249014 PDCD6O75340 191 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF728P0DKX0 622 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 HKR1P10072 659 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 CD59P13987 128 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 FXYD4P59646 89 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 ZNF273Q14593 569 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 RNF141Q8WVD5 230 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 NARS2Q96I59 477 aaKnown RBP16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 GPR87Q9BY21 358 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 PRRG4Q9BZD6 226 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 NCOR1O75376 2440 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 SP9P0CG40 484 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 FCGR2CP31995 323 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 AKR1C2P52895 323 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 AKR1C1Q04828 323 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 OR2A2Q6IF42 318 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 OR56B2PQ8NGI1 322 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms