RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 FAM90A18PA6NE21 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A16PA6NEW6 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A20PA6NIJ5 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A8PA6NJQ4 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A7PA6NKC0 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A22PA8MWA6 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A12PA8MX19 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A5PA8MXJ8 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A23PA8MXZ1 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 OR2F2O95006 317 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A15PP0C7V4 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A13PP0C7W8 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A14PP0C7W9 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A24PP0C7X0 464 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 CCNOP22674 350 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 PTGER4P35408 488 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 MALLQ13021 153 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 OR2F1Q13607 317 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 DHRS11Q6UWP2 260 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 SLC25A26Q70HW3 274 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 MRPL21Q7Z2W9 205 aaKnown RBP16.46■□□□□ 0.23
YBX3-201ENST00000228251 SLC51BQ86UW2 128 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 GMPPAQ96IJ6 420 aaPredicted RBP16.46■□□□□ 0.23
YBX3-201ENST00000228251 DHRS9Q9BPW9 319 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 PAPOLGQ9BWT3 736 aaKnown RBP16.46■□□□□ 0.23
YBX3-201ENST00000228251 WDR13Q9H1Z4 485 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 COMMD9Q9P000 198 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 PRR33A8MZF0 331 aa16.46■□□□□ 0.22
YBX3-201ENST00000228251 NMBP08949 121 aa16.46■□□□□ 0.22
YBX3-201ENST00000228251 ZDHHC23Q8IYP9 409 aa16.46■□□□□ 0.22
YBX3-201ENST00000228251 DYRK2Q92630 601 aa16.46■□□□□ 0.22
YBX3-201ENST00000228251 MED9Q9NWA0 146 aa16.46■□□□□ 0.22
YBX3-201ENST00000228251 CACNA1GO43497 2377 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 CTSDP07339 412 aaPredicted RBP16.45■□□□□ 0.22
YBX3-201ENST00000228251 P2RX3P56373 397 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 PLP2Q04941 152 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 TCF15Q12870 199 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 IL15RAQ13261 267 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 CLN3Q13286 438 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 SLC9A3R2Q15599 337 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 MARS2Q96GW9 593 aaKnown RBP16.45■□□□□ 0.22
YBX3-201ENST00000228251 ZNF2Q9BSG1 426 aaPredicted RBP16.45■□□□□ 0.22
YBX3-201ENST00000228251 RDH8Q9NYR8 311 aa16.45■□□□□ 0.22
YBX3-201ENST00000228251 ZNF629Q9UEG4 869 aaPredicted RBP16.45■□□□□ 0.22
YBX3-201ENST00000228251 CD300LBA8K4G0 201 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 OR5H8P0DN80 308 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 FUT3P21217 361 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 OPRM1P35372 400 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 CCL11P51671 97 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 ARPC4P59998 168 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 RAB14P61106 215 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 ACOT7LQ6ZUV0 252 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 COMMD7Q86VX2 200 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 RNF126Q9BV68 326 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 PRR13Q9NZ81 148 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 LOC400499M0QZD8 3231 aa16.44■□□□□ 0.22
YBX3-201ENST00000228251 FAM25EA8MYX2 175 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 EEF1E1-BLOC1S5C9J1V9 151 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 ADAP1O75689 374 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 WISP2O76076 250 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 LYL1P12980 280 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 PSMB6P28072 239 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 LRRC37A5PQ49AS3 106 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 TMEM211Q6ICI0 200 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 RGS7BPQ6MZT1 257 aaPredicted RBP16.43■□□□□ 0.22
YBX3-201ENST00000228251 BRICD5Q6PL45 260 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 ALKAL2Q6UX46 152 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 TFAP2EQ6VUC0 442 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 MDP1Q86V88 176 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 NAXEQ8NCW5 288 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 OR5A2Q8NGI9 324 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 COQ8AQ8NI60 647 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 ANGPTL6Q8NI99 470 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 GLRX2Q9NS18 164 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 NECAP2Q9NVZ3 263 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 RCC2Q9P258 522 aaKnown RBP16.43■□□□□ 0.22
YBX3-201ENST00000228251 MBD2Q9UBB5 411 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 ESPL1Q14674 2120 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 PRSS44E7EML9 344 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 F8VVB4 439 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 F8VWA3 439 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 BCL2L11O43521 198 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 LILRA1O75019 489 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 BCL3P20749 454 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 GPM6AP51674 278 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 FGF12P61328 243 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 CYCSP99999 105 aaKnown RBP16.43■□□□□ 0.22
YBX3-201ENST00000228251 TOR2AQ5JU69 321 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 Q6ZS49 121 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 OR5M9Q8NGP3 310 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 OR5P3Q8WZ94 311 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 HS3ST6Q96QI5 342 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 DMRTA2Q96SC8 542 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 REG4Q9BYZ8 158 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 CHMP1AQ9HD42 196 aaPredicted RBP16.43■□□□□ 0.22
YBX3-201ENST00000228251 MTCH1Q9NZJ7 389 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 SHANK1Q9Y566 2161 aa16.43■□□□□ 0.22
YBX3-201ENST00000228251 CRYM-AS1A6NIL9 109 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 MPTX1A8MV57 137 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 H0YIZ8 118 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms