RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 NOSIPQ9Y314 301 aaKnown RBP19.04■□□□□ 0.64
SMARCD2-201ENST00000225742 LAMA1P25391 3075 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 PRSS44E7EML9 344 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 RPL36A-HNRNPH2H7BZ11 118 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 GEMIN2O14893 280 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 TPD52L2O43399 206 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 MRPL33O75394 65 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 PLATP00750 562 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 GAPDHP04406 335 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 COX5BP10606 129 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 DEFA5Q01523 94 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 ABCA11PQ4W5N1 156 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 PABPC1L2AQ5JQF8 200 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 GGNBP1Q5YKI7 109 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 Q8NFD4 153 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 ABHD3Q8WU67 409 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 NARS2Q96I59 477 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 ZNF845Q96IR2 970 aaPredicted RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 THOC3Q96J01 351 aaKnown RBP19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 PLEKHA2Q9HB19 425 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 LPAR3Q9UBY5 353 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 ST3GAL6Q9Y274 331 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 TRIOBPQ9H2D6 2365 aa19.03■□□□□ 0.64
SMARCD2-201ENST00000225742 TRIM77I1YAP6 450 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 DNASE2O00115 360 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 DEDDO75618 318 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 ATG12O94817 140 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 PIGPP57054 158 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 ATRAIDQ6UW56 229 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 PIGCQ92535 297 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 GPR87Q9BY21 358 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 NKX6-2Q9C056 277 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 ZC4H2Q9NQZ6 224 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 ABI3Q9P2A4 366 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 SDK2Q58EX2 2172 aa19.02■□□□□ 0.64
SMARCD2-201ENST00000225742 CST4P01036 141 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 EDN3P14138 238 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 FUT3P21217 361 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 RRADP55042 308 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 RBM11P57052 281 aaKnown RBP19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 TMEM187Q14656 261 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 TSPO2Q5TGU0 170 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 SAXO1Q8IYX7 474 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 OR2M7Q8NG81 312 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 OR5T2Q8NGG2 359 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 SYT3Q9BQG1 590 aa19.02■□□□□ 0.63
SMARCD2-201ENST00000225742 K7EPK0 472 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 JMJD7P0C870 316 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 RPL12P30050 165 aaKnown RBP19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 OPRM1P35372 400 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 GLP1RP43220 463 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 PIGYQ3MUY2 71 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 C10orf91Q5T1B1 145 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 SVBPQ8N300 66 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 FAM71E2Q8N5Q1 922 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 SMIM8Q96KF7 97 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 PRRX2Q99811 253 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 LIME1Q9H400 295 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 RNF122Q9H9V4 155 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 PCSK5Q92824 1860 aa19.01■□□□□ 0.63
SMARCD2-201ENST00000225742 SYNGR4O95473 234 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 LHX2P50458 406 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 PJVKQ0ZLH3 352 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 SRSF7Q16629 238 aaKnown RBP eCLIP19■□□□□ 0.63
SMARCD2-201ENST00000225742 ABHD17BQ5VST6 288 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 SLC22A25Q6T423 547 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 CCDC71LQ8N9Z2 235 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 MRPL24Q96A35 216 aaKnown RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 MOB3AQ96BX8 217 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF703Q9H7S9 590 aaPredicted RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF705EA8MWA4 302 aaPredicted RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 C21orf140B9A014 251 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 H7C1Q1 480 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 JTBO76095 146 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 BLOC1S1P78537 153 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 ARF1P84077 181 aaKnown RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 MST1LQ2TV78 715 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 FAM122CQ6P4D5 195 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 Q6ZS49 121 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 CPEB3Q8NE35 698 aaKnown RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 RTN4IP1Q8WWV3 396 aaPredicted RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 TAF9BQ9HBM6 251 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 PLSCR2Q9NRY7 297 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF629Q9UEG4 869 aaPredicted RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 CARHSP1Q9Y2V2 147 aaKnown RBP19■□□□□ 0.63
SMARCD2-201ENST00000225742 STARD10Q9Y365 291 aa19■□□□□ 0.63
SMARCD2-201ENST00000225742 NEURL1O76050 574 aa18.99■□□□□ 0.63
SMARCD2-201ENST00000225742 FCGR2CP31995 323 aa18.99■□□□□ 0.63
SMARCD2-201ENST00000225742 SPINK14Q6IE38 97 aa18.99■□□□□ 0.63
SMARCD2-201ENST00000225742 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.99■□□□□ 0.63
SMARCD2-201ENST00000225742 TSNAXQ99598 290 aaKnown RBP18.99■□□□□ 0.63
SMARCD2-201ENST00000225742 OR2S2Q9NQN1 319 aa18.99■□□□□ 0.63
SMARCD2-201ENST00000225742 PRUNE2Q8WUY3 3088 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF724A8MTY0 619 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 E5RGE8 158 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF587BE7ETH6 402 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 CLDN18P56856 261 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 TMEM268Q5VZI3 342 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 LIAT1Q6ZQX7 453 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 FAM185AQ8N0U4 392 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms