RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 HTR2CP28335 458 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 RPS19P39019 145 aaKnown RBP13.75□□□□□ -0.21
LIM2-201ENST00000221973 TMEM33P57088 247 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 RIN1Q13671 783 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 P2RY14Q15391 338 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 RSU1Q15404 277 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 RAB11BQ15907 218 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 C1orf100Q5SVJ3 147 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 GLIPR1L1Q6UWM5 242 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 PEG10Q86TG7 708 aaKnown RBP13.75□□□□□ -0.21
LIM2-201ENST00000221973 SAXO1Q8IYX7 474 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 PXT1Q8NFP0 134 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 OR6M1Q8NGM8 313 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 OR10K1Q8NGX5 313 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 NDNFQ8TB73 568 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 ISOC1Q96CN7 298 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 SEH1LQ96EE3 360 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 TIMD4Q96H15 378 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 NRIP2Q9BQI9 281 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 NPTNQ9Y639 398 aa13.75□□□□□ -0.21
LIM2-201ENST00000221973 PPIAL4EA0A075B759 164 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 NOTOA8MTQ0 251 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 A8MV72 311 aaPredicted RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 PPIAL4DF5H284 164 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 SLC17A2O00624 439 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 SLC22A1O15245 554 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 NOS1APO75052 506 aaPredicted RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 IL1AP01583 271 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 SFTPBP07988 381 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 ACAA1P09110 424 aaPredicted RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 PPIAL4FP0DN26 164 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 GPR6P46095 362 aaPredicted RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 CLDN12P56749 244 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 DSCR9P59020 149 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 LOXL1Q08397 574 aaPredicted RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 SPCS2Q15005 226 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 USP43Q70EL4 1123 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 C10orf105Q8TEF2 133 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 RAB1CQ92928 201 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 PIMREGQ9BSJ6 248 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 RBM38Q9H0Z9 239 aaKnown RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 METTL9Q9H1A3 318 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 RBFOX1Q9NWB1 397 aaKnown RBP13.74□□□□□ -0.21
LIM2-201ENST00000221973 DNAJB11Q9UBS4 358 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 WIPI2Q9Y4P8 454 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 PPIAL4AQ9Y536 164 aa13.74□□□□□ -0.21
LIM2-201ENST00000221973 ISPDA4D126 451 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 OOEPA6NGQ2 149 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 H3BMQ9 156 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.73□□□□□ -0.21
LIM2-201ENST00000221973 AIPO00170 330 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 LGALS8O00214 317 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 KDM4BO94953 1096 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 HTR3BO95264 441 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 SLC2A2P11168 524 aaPredicted RBP13.73□□□□□ -0.21
LIM2-201ENST00000221973 SERPINA2P20848 420 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 GIFP27352 417 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
LIM2-201ENST00000221973 ERVK11-1P61568 191 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 BTG1P62324 171 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 ZMYND11Q15326 602 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 SLC22A6Q4U2R8 563 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 SFXN4Q6P4A7 337 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 ASCL4Q6XD76 172 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 ACP7Q6ZNF0 438 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 EMG1Q92979 244 aaKnown RBP13.73□□□□□ -0.21
LIM2-201ENST00000221973 SLC25A28Q96A46 364 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 C12orf43Q96C57 262 aaKnown RBP13.73□□□□□ -0.21
LIM2-201ENST00000221973 BPESC1Q9GZL8 116 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 STEAP1Q9UHE8 339 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 DAPK2Q9UIK4 370 aa13.73□□□□□ -0.21
LIM2-201ENST00000221973 A0A0B4J203 849 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 SMIM31A0A1B0GVY4 71 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 NDUFS8O00217 210 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 IGHV2-70P01814 119 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 CSTBP04080 98 aaKnown RBP13.72□□□□□ -0.21
LIM2-201ENST00000221973 PRKACAP17612 351 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 SMIM21Q3B7S5 101 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 Q8IYB0 196 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 FAM58AQ8N1B3 248 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 OR5T2Q8NGG2 359 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 TBC1D15Q8TC07 691 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 C1orf147Q96MC9 270 aaPredicted RBP13.72□□□□□ -0.21
LIM2-201ENST00000221973 KCNK15Q9H427 330 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 NARFLQ9H6Q4 476 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 HES4Q9HCC6 221 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 RASL12Q9NYN1 266 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 IL36RNQ9UBH0 155 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 RSL24D1Q9UHA3 163 aaKnown RBP13.72□□□□□ -0.21
LIM2-201ENST00000221973 MALRD1Q5VYJ5 2156 aa13.72□□□□□ -0.21
LIM2-201ENST00000221973 TRAV38-1A0A0B4J264 116 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 A0A1W2PP11 408 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 GYPAP02724 150 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 UBBP0CG47 229 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms