RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 A0A1W2PPC1 479 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 BCL2L11O43521 198 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 MPZL1O95297 269 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 FOLR2P14207 255 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ABOP16442 354 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 MST1P26927 711 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 TNFSF10P50591 281 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 TAS2R19P59542 299 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SLC35A1P78382 337 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SLC17A1Q14916 467 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 C11orf87Q6NUJ2 197 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 AAED1Q7RTV5 226 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 KMT5CQ86Y97 462 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 OR10W1Q8NGF6 305 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 OR14K1Q8NGZ2 314 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SLAMF6Q96DU3 332 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 BORCS8Q96FH0 119 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 TSPAN32Q96QS1 320 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 PLEKHJ1Q9NW61 149 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 PPP1R3CQ9UQK1 317 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ALPK3Q96L96 1907 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 PLXND1Q9Y4D7 1925 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ALG1L2C9J202 215 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SLC33A1O00400 549 aaPredicted RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 SMIM10L1P0DMW3 83 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 IRF2P14316 349 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 AGAP20933 346 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ZNF93P35789 620 aaPredicted RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 FXYD4P59646 89 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 HERV-K104P61576 105 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 PMP22Q01453 160 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 STPG1Q5TH74 334 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 TRAPPC6BQ86SZ2 158 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 OR51E1Q8TCB6 317 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 RNF141Q8WVD5 230 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 CMBLQ96DG6 245 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 SMIM10Q96HG1 83 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 BANF2Q9H503 90 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 EXOSC3Q9NQT5 275 aaKnown RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 ST6GALNAC2Q9UJ37 374 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 MEMO1Q9Y316 297 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 COL4A4P53420 1690 aaPredicted RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 LOC100289279A0A1B0GTE1 492 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 NKX6-3A6NJ46 265 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 C17orf51A8MQB3 221 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 GLSO94925 669 aaPredicted RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 ACTL6AO96019 429 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 GLI4P10075 376 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 CTLA4P16410 223 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 CDAP32320 146 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ARL3P36405 182 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ID4P47928 161 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 C2orf76Q3KRA6 126 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 HIST2H3AQ71DI3 136 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ZNF664Q8N3J9 261 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 NPEPL1Q8NDH3 523 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 ST8SIA1Q92185 356 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 GNRHR2Q96P88 292 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SEMA5BQ9P283 1151 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 NPTNQ9Y639 398 aa9.36□□□□□ -0.91
VPS18-201ENST00000220509 SPTAN1Q13813 2472 aaKnown RBP9.36□□□□□ -0.91
VPS18-201ENST00000220509 ELOA3CA0A087WX78 387 aaPredicted RBP9.35□□□□□ -0.91
VPS18-201ENST00000220509 OR2A4O95047 310 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 MELTFP08582 738 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 SELEP16581 610 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 EFNB1P98172 346 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 INSM1Q01101 510 aaPredicted RBP9.35□□□□□ -0.91
VPS18-201ENST00000220509 ELFN2Q5R3F8 820 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 OR52N5Q8NH56 324 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 PIGTQ969N2 578 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 ERGIC1Q969X5 290 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 OR2A7Q96R45 310 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 ZNF649Q9BS31 505 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
VPS18-201ENST00000220509 THADAQ6YHU6 1953 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 TMEM272A0A1B0GTI8 110 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 OR5H15A6NDH6 313 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 OR5H1A6NKK0 313 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 H7C417 338 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 GSTZ1O43708 216 aaPredicted RBP9.35□□□□□ -0.91
VPS18-201ENST00000220509 PMS2P2O95744 297 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 RPA2P15927 270 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 PNLIPP16233 465 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 CEACAM3P40198 252 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 WDR38Q5JTN6 314 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 MDGA2Q7Z553 956 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 ATG4DQ86TL0 474 aaPredicted RBP9.35□□□□□ -0.91
VPS18-201ENST00000220509 BATF2Q8N1L9 274 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 OR10AD1Q8NGE0 317 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 MFSD8Q8NHS3 518 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 TMEM59Q9BXS4 323 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 MTFP1Q9UDX5 166 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 HIF3AQ9Y2N7 669 aa9.35□□□□□ -0.91
VPS18-201ENST00000220509 MRPS28Q9Y2Q9 187 aaKnown RBP9.35□□□□□ -0.91
VPS18-201ENST00000220509 DCTN6O00399 190 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms