RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PNPP00491 289 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 ZFP36L2P47974 494 aaKnown RBP16.77■□□□□ 0.28
SMPD3-201ENST00000219334 TMPRSS3P57727 454 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 TNXAQ16473 311 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 GMPPAQ96IJ6 420 aaPredicted RBP16.77■□□□□ 0.28
SMPD3-201ENST00000219334 OR2J3O76001 311 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 IGHV4-34P06331 123 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 OR10Z1Q8NGY1 313 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 WDR61Q9GZS3 305 aaKnown RBP16.77■□□□□ 0.28
SMPD3-201ENST00000219334 COX6B1P14854 86 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 FAM3AP98173 230 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 TMEM267Q0VDI3 215 aaPredicted RBP16.77■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF788Q6ZQV5 615 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 G3V3Q6 166 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 GFRA3O60609 400 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 SELENOPP49908 381 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 MLF1P58340 268 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 INO80CQ6PI98 192 aaPredicted RBP16.77■□□□□ 0.27
SMPD3-201ENST00000219334 ZDHHC22Q8N966 263 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 OR5M8Q8NGP6 311 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 RAB40CQ96S21 281 aa16.77■□□□□ 0.27
SMPD3-201ENST00000219334 K7ESF4 209 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF574Q6ZN55 896 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-201ENST00000219334 RAB18Q9NP72 206 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 MS4A18H0YCH9 400 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 MOSPD3O75425 235 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 PAX5Q02548 391 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 MS4A18Q3C1V0 323 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 FNDC7Q5VTL7 733 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 THSD4Q6ZMP0 1018 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 PTPMT1Q8WUK0 201 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-201ENST00000219334 PIK3IP1Q96FE7 263 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 SIRT5Q9NXA8 310 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 RASL12Q9NYN1 266 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 TINAGQ9UJW2 476 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 A0A1B0GTH9 108 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 FABP9Q0Z7S8 132 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 NCR3LG1Q68D85 454 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 MRM1Q6IN84 353 aaKnown RBP16.76■□□□□ 0.27
SMPD3-201ENST00000219334 WDR31Q8NA23 367 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 OR4S2Q8NH73 311 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 ABHD3Q8WU67 409 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 TREM2Q9NZC2 230 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 IGHV3-13P01766 116 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 IGHV3-7P01780 117 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 H3F3AP84243 136 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 CD300LDQ6UXZ3 194 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 ATG4DQ86TL0 474 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-201ENST00000219334 OR52B4Q8NGK2 314 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 A0A1W2PPC1 479 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 ADAM10O14672 748 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 HOXD4P09016 255 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-201ENST00000219334 FOSL1P15407 271 aa16.76■□□□□ 0.27
SMPD3-201ENST00000219334 LIFP15018 202 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 OR8B12Q8NGG6 310 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 COA4Q9NYJ1 87 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 EXOGQ9Y2C4 368 aaKnown RBP16.75■□□□□ 0.27
SMPD3-201ENST00000219334 FBXW9Q5XUX1 488 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 WDR89Q96FK6 387 aaPredicted RBP16.75■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF665Q9H7R5 613 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 CA10Q9NS85 328 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 TMEFF2Q9UIK5 374 aaPredicted RBP16.75■□□□□ 0.27
SMPD3-201ENST00000219334 CYR61O00622 381 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 HYAL3O43820 417 aaPredicted RBP16.75■□□□□ 0.27
SMPD3-201ENST00000219334 PRF1P14222 555 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 KRTCAP3Q53RY4 240 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 ETV3LQ6ZN32 361 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 MAP6Q96JE9 813 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 CXorf58Q96LI9 332 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 GPR35Q9HC97 309 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 GALP22466 123 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 FGF9P31371 208 aaPredicted RBP16.75■□□□□ 0.27
SMPD3-201ENST00000219334 HMGA2P52926 109 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 C1orf185Q5T7R7 199 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 C1QL3Q5VWW1 255 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 CABLES2Q9BTV7 478 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 CLN8Q9UBY8 286 aa16.75■□□□□ 0.27
SMPD3-201ENST00000219334 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 C3orf85A0A1B0GTC6 90 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 PYCARD-AS1I3L0S3 204 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 FUCA1P04066 466 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 ECM29Q5VYK3 1845 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF320A2RRD8 509 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 DNPH1O43598 174 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 ONECUT2O95948 504 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 PDZK1IP1Q13113 114 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 SPICQ8N5J4 248 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 OR1L4Q8NGR5 311 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 NRTNQ99748 197 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 CLEC5AQ9NY25 188 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 SLC45A2Q9UMX9 530 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 F5H697 171 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 CDIPTO14735 213 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 SLC25A5P05141 298 aaKnown RBP16.74■□□□□ 0.27
SMPD3-201ENST00000219334 SLC38A11Q08AI6 406 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 SPRED2Q7Z698 418 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 PECRQ9BY49 303 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 TMPRSS13Q9BYE2 586 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 ATXN7O15265 892 aaPredicted RBP16.74■□□□□ 0.27
SMPD3-201ENST00000219334 SCAND1P57086 179 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms