RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PPICP45877 212 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 BPIFB3P59826 476 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 ERVFRD-1P60508 538 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 ZNF816Q0VGE8 651 aaPredicted RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 OSR2Q8N2R0 312 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 OR2M7Q8NG81 312 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 NRSN2Q9GZP1 204 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 TXNIPQ9H3M7 391 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 SRD5A3Q9H8P0 318 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 MANBALQ9NQG1 85 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 C20orf141Q9NUB4 165 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 TJP1Q07157 1748 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 NPIPB9F8W1W9 429 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 M0R135 149 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 SPRY1O43609 319 aaPredicted RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 IER3P46695 156 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 COMPP49747 757 aaPredicted RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 IL24Q13007 206 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 KIRREL2Q6UWL6 708 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 OR4B1Q8NGF8 309 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 ZNF799Q96GE5 643 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 C4orf45Q96LM5 186 aa9.32□□□□□ -0.92
VCL-201ENST00000211998 RCC2Q9P258 522 aaKnown RBP9.32□□□□□ -0.92
VCL-201ENST00000211998 PHIPQ8WWQ0 1821 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 K7ESM1 405 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 FAM87AP0C7U9 286 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
VCL-201ENST00000211998 RAC1P63000 192 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 TMEM91Q6ZNR0 172 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 OR5D13Q8NGL4 314 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 C11orf40Q8WZ69 217 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 ST8SIA1Q92185 356 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 TIMD4Q96H15 378 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 AKIRIN1Q9H9L7 192 aaPredicted RBP9.31□□□□□ -0.92
VCL-201ENST00000211998 C5orf52A6NGY3 159 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 SIRPB1O00241 398 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 NEURL1O76050 574 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 GRPP07492 148 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 CAPZBP47756 277 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 CYB561D1Q8N8Q1 229 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 ADAD2Q8NCV1 583 aaKnown RBP9.31□□□□□ -0.92
VCL-201ENST00000211998 NRAPQ86VF7 1730 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 SNURFLB1AK76 121 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 COX7A2P2O60397 106 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 CLEC3BP05452 202 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 GPR12P47775 334 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 DMWDQ09019 674 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 OR5AS1Q8N127 324 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 KCNE4Q8WWG9 221 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 ALX4Q9H161 411 aaPredicted RBP9.31□□□□□ -0.92
VCL-201ENST00000211998 B4E171 279 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 CSN3P07498 182 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 H1FXQ92522 213 aaKnown RBP9.31□□□□□ -0.92
VCL-201ENST00000211998 OR2D2Q9H210 308 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 R3HDMLQ9H3Y0 253 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 MED29Q9NX70 200 aa9.31□□□□□ -0.92
VCL-201ENST00000211998 BTAF1O14981 1849 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 FGF17O60258 216 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 RAE1P78406 368 aaKnown RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 COX19Q49B96 90 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 BARX1Q9HBU1 254 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 MYO5AQ9Y4I1 1855 aaKnown RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 TIMM10BQ9Y5J6 103 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 PRRT4C9JH25 899 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 H3BVH4 76 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 ARR3P36575 388 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 UQCRFS1P47985 274 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 MRGPREQ86SM8 312 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 OR4C12Q96R67 309 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 ZPBPQ9BS86 351 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 C12orf49Q9H741 205 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 PRRG2O14669 202 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 CBR3O75828 277 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 DEFA4P12838 97 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 NDUFB7P17568 137 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 LSRQ86X29 649 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 CA13Q8N1Q1 262 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 TBX21Q9UL17 535 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 POLDIP2Q9Y2S7 368 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 ICOSLGO75144 302 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 FAHP16930 419 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 TEX30Q5JUR7 227 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 MRPL54Q6P161 138 aaKnown RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 RSPO2Q6UXX9 243 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 MRGPRGQ86SM5 289 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 ZNF547Q8IVP9 402 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 SARAFQ96BY9 339 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 ADAT3Q96EY9 351 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 CNRIP1Q96F85 164 aaPredicted RBP9.3□□□□□ -0.92
VCL-201ENST00000211998 TAAR6Q96RI8 345 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 SMDT1Q9H4I9 107 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 ZNF355PQ9NSJ1 428 aa9.3□□□□□ -0.92
VCL-201ENST00000211998 A0A1W2PPC4 97 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 OGG1O15527 345 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms