RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SPATA46Q5T0L3 261 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 OR9K2Q8NGE7 335 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 CALHM2Q9HA72 323 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.31
EFNB1-201ENST00000204961 RNASEK-C17orf49H0YIS7 233 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 SNAPINO95295 136 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 IL2RAP01589 272 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF708P17019 499 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 CAMLGP49069 296 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 F2RL1P55085 397 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 SLC35A1P78382 337 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 SSBP1Q04837 148 aaKnown RBP13.14□□□□□ -0.31
EFNB1-201ENST00000204961 ZP4Q12836 540 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 LPCAT3Q6P1A2 487 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 HLA-HP01893 362 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 FBP1P09467 338 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 SPEM2Q0P670 501 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 MIDNQ504T8 468 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 AAED1Q7RTV5 226 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 SLC16A14Q7RTX9 510 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
EFNB1-201ENST00000204961 hCG_1809904A0A1W2PP81 198 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 A0A1W2PR64 198 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 A0A1W2PRV1 198 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 HS3ST1O14792 307 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 DHRS3O75911 302 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 IGHMP01871 453 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 TAS2R31P59538 309 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
EFNB1-201ENST00000204961 COL19A1Q14993 1142 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 NSUN5P2Q63ZY6 315 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 PRSS54Q6PEW0 395 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 GPR137CQ8N3F9 429 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 NAT6Q93015 286 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 NELFAQ9H3P2 528 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 SPACA1Q9HBV2 294 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 PLA2G3Q9NZ20 509 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 HSD17B6O14756 317 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
EFNB1-201ENST00000204961 SELEP16581 610 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 GDF1P27539 372 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 CARD18P57730 90 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 FBXW12Q6X9E4 464 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 CD79AP11912 226 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 FPR2P25090 351 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF84P51523 738 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF92Q03936 586 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ECH1Q13011 328 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 TSC22D1Q15714 1073 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 RABEPKQ7Z6M1 372 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 ZFP62Q8NB50 900 aaPredicted RBP13.13□□□□□ -0.31
EFNB1-201ENST00000204961 RDH5Q92781 318 aa13.13□□□□□ -0.31
EFNB1-201ENST00000204961 A0A1W2PPE3 182 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 HKR1P10072 659 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 ZNF14P17017 642 aaPredicted RBP13.12□□□□□ -0.31
EFNB1-201ENST00000204961 SUCLG1P53597 346 aaKnown RBP13.12□□□□□ -0.31
EFNB1-201ENST00000204961 CYCSP99999 105 aaKnown RBP13.12□□□□□ -0.31
EFNB1-201ENST00000204961 CALHM1Q8IU99 346 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 MAML2Q8IZL2 1156 aaPredicted RBP13.12□□□□□ -0.31
EFNB1-201ENST00000204961 CADM4Q8NFZ8 388 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 LPAR3Q9UBY5 353 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
EFNB1-201ENST00000204961 ARFGEF3Q5TH69 2177 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 A6NLC8 198 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 F8VVB4 439 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 F8VWA3 439 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 MELTFP08582 738 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 TCN2P20062 427 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 GNRHRP30968 328 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 RAB5BP61020 215 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 DHRS11Q6UWP2 260 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
EFNB1-201ENST00000204961 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
EFNB1-201ENST00000204961 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 ZIC3O60481 467 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 CELA3AP09093 270 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 SSR4P51571 173 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 HAGHQ16775 308 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 MST1LQ2TV78 715 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 WDR74Q6RFH5 385 aaPredicted RBP13.11□□□□□ -0.31
EFNB1-201ENST00000204961 C5orf46Q6UWT4 87 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 ARRDC1Q8N5I2 433 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 OR51H1Q8NH63 302 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 SPTSSAQ969W0 71 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 NRIP2Q9BQI9 281 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 HS3ST3B1Q9Y662 390 aa13.11□□□□□ -0.31
EFNB1-201ENST00000204961 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms