RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SSBP1Q04837 148 aaKnown RBP16.66■□□□□ 0.26
MBD3-201ENST00000156825 ZPLD1Q8TCW7 415 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 TCRBV16S1A1N1A0A5B0 115 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 MGAT2Q10469 447 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 TINAGQ9UJW2 476 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 MDC1Q14676 2089 aaKnown RBP16.66■□□□□ 0.26
MBD3-201ENST00000156825 CTRB1P17538 263 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 LPAR6P43657 344 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 CTRB2Q6GPI1 263 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 CORO2AQ92828 525 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 MOB3AQ96BX8 217 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 LRFN3Q9BTN0 628 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 TGIF2Q9GZN2 237 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 ICAM5Q9UMF0 924 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 TRAPPC4Q9Y296 219 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 ZNF831Q5JPB2 1677 aa16.66■□□□□ 0.26
MBD3-201ENST00000156825 COX7A2P2O60397 106 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 ZDHHC16Q969W1 377 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 AKR1E2Q96JD6 320 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 OR2D2Q9H210 308 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 OR5AC1P0C628 307 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 KLF3P57682 345 aaPredicted RBP16.65■□□□□ 0.26
MBD3-201ENST00000156825 DEFA6Q01524 100 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 HIKESHIQ53FT3 197 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 TMEM108Q6UXF1 575 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 OR2W3Q7Z3T1 314 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 LSMEM1Q8N8F7 131 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 OR5M8Q8NGP6 311 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 FAM157AC9JC47 383 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 HPP00738 406 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 IGKV1D-16P01601 117 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 INPP5JQ15735 1006 aaPredicted RBP16.65■□□□□ 0.26
MBD3-201ENST00000156825 C8orf82Q6P1X6 216 aaPredicted RBP16.65■□□□□ 0.26
MBD3-201ENST00000156825 CABLES2Q9BTV7 478 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 TRAV8-7A0A075B6U6 113 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 CDIPTO14735 213 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 KDF1Q8NAX2 398 aaPredicted RBP16.65■□□□□ 0.26
MBD3-201ENST00000156825 OR13D1Q8NGV5 346 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 ZMIZ1Q9ULJ6 1067 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 C20orf202A1L168 122 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 RPL7L1Q6DKI1 246 aaKnown RBP16.65■□□□□ 0.26
MBD3-201ENST00000156825 TEX261Q6UWH6 196 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 BTNL3Q6UXE8 466 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 Q8IYB0 196 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 U3KQ87 197 aa16.65■□□□□ 0.26
MBD3-201ENST00000156825 SDK2Q58EX2 2172 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 FAM24AA6NFZ4 105 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 RFPL4AA6NLU0 287 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 RFPL4AL1F8VTS6 287 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 OR6S1Q8NH40 331 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 M1APQ8TC57 530 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 FAM103A1Q9BTL3 118 aaKnown RBP16.64■□□□□ 0.25
MBD3-201ENST00000156825 DUSP15Q9H1R2 295 aaPredicted RBP16.64■□□□□ 0.25
MBD3-201ENST00000156825 CACNG5Q9UF02 275 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 POM121L2Q96KW2 1035 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 WDFY2Q96P53 400 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 CLCF1Q9UBD9 225 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 HFEQ30201 348 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 ZNF770Q6IQ21 691 aaPredicted RBP16.64■□□□□ 0.25
MBD3-201ENST00000156825 JMJD6Q6NYC1 403 aaPredicted RBP16.64■□□□□ 0.25
MBD3-201ENST00000156825 TCTE3Q8IZS6 198 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 CES1P1Q9UKY3 287 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 METTL15P1P0C7V9 234 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 ZNF385AQ96PM9 386 aaKnown RBP16.64■□□□□ 0.25
MBD3-201ENST00000156825 SLC26A1Q9H2B4 701 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 HES4Q9HCC6 221 aa16.64■□□□□ 0.25
MBD3-201ENST00000156825 GEMIN2O14893 280 aaKnown RBP16.63■□□□□ 0.25
MBD3-201ENST00000156825 RBP4P02753 201 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 ACSM6Q6P461 480 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 C12orf10Q9HB07 376 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 RHOFQ9HBH0 211 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 NIT2Q9NQR4 276 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 MYOFQ9NZM1 2061 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 C9orf170A2RU37 121 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 SLC31A2O15432 143 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 GP1BAP07359 652 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 RD3LP0DJH9 198 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 CTDSP1Q9GZU7 261 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 RASL12Q9NYN1 266 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 CHEK1O14757 476 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 GREM1O60565 184 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 ENDOGQ14249 297 aaKnown RBP16.63■□□□□ 0.25
MBD3-201ENST00000156825 OR5C1Q8NGR4 320 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 RPEQ96AT9 228 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 CMTM3Q96MX0 182 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 WISP3O95389 354 aaPredicted RBP16.63■□□□□ 0.25
MBD3-201ENST00000156825 ZNF17P17021 662 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 HLXQ14774 488 aaPredicted RBP16.63■□□□□ 0.25
MBD3-201ENST00000156825 GGNBP1Q5YKI7 109 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 MISP3Q96FF7 219 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 SLC17A5Q9NRA2 495 aa16.63■□□□□ 0.25
MBD3-201ENST00000156825 C3orf85A0A1B0GTC6 90 aa16.62■□□□□ 0.25
MBD3-201ENST00000156825 MIDNQ504T8 468 aa16.62■□□□□ 0.25
MBD3-201ENST00000156825 DCAF10Q5QP82 559 aa16.62■□□□□ 0.25
MBD3-201ENST00000156825 ZBTB37Q5TC79 503 aa16.62■□□□□ 0.25
MBD3-201ENST00000156825 PRSS42Q7Z5A4 293 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms