RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TBR1Q16650 682 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 Q5BKY6 102 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 UNQ6126/PRO20091Q6UXV3 157 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 C12orf45Q8N5I9 185 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 ASCC1Q8N9N2 400 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 OR11H4Q8NGC9 324 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 OR2T35Q8NGX2 323 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 RADILQ96JH8 1075 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 SLX1AQ9BQ83 275 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 SULT4A1Q9BR01 284 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 OPN3Q9H1Y3 402 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 PPA2Q9H2U2 334 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 PLK3Q9H4B4 646 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 FN3KRPQ9HA64 309 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 OSGIN2Q9Y236 505 aa12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 PTPRZ1P23471 2315 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-201ENST00000023939 A0A1W2PR80 420 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 OR5H1A6NKK0 313 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 IQCF6A8MYZ5 107 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 MSTNO14793 375 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 LILRA1O75019 489 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 HLA-GP17693 338 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 DNASE1P24855 282 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 CEACAM8P31997 349 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 NPBWR2P48146 333 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 DHODHQ02127 395 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 IL24Q13007 206 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 SURF2Q15527 256 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 TSC22D1Q15714 1073 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 MPV17LQ2QL34 196 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 CHRFAM7AQ494W8 412 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 FAM76BQ5HYJ3 339 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 BHLHA15Q7RTS1 189 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 LYG2Q86SG7 212 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 LINC00596Q86U02 117 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 TMEM185AQ8NFB2 350 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 CMSS1Q9BQ75 279 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 SFXN3Q9BWM7 321 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 OR51I2Q9H344 312 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 MTCH1Q9NZJ7 389 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF230Q9UIE0 474 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 ITGB1BP2Q9UKP3 347 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 GPR132Q9UNW8 380 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 TP53TG5Q9Y2B4 290 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 RGS11O94810 467 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 FCGR3AP08637 254 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 BCL3P20749 454 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 IL32P24001 234 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 FPR2P25090 351 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 ECI1P42126 302 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 SRSF4Q08170 494 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 TMEM211Q6ICI0 200 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 LPCAT3Q6P1A2 487 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 OR13G1Q8NGZ3 307 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 SLC25A40Q8TBP6 338 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 SLAMF9Q96A28 289 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 TMPRSS13Q9BYE2 586 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 OR2J1Q9GZK6 312 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 DECR2Q9NUI1 292 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF581Q9P0T4 197 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 RCC2Q9P258 522 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 ANXA10Q9UJ72 324 aa12.25□□□□□ -0.45
RTFDC1-201ENST00000023939 TRAPPC2LH3BP13 241 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 TDGF1P3P51864 188 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 TSPAN5P62079 268 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 SRSF7Q16629 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 C3orf36Q3SXR2 165 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 AADACL3Q5VUY0 350 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 NCCRP1Q6ZVX7 275 aaPredicted RBP12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 NAXEQ8NCW5 288 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 OR1J1Q8NGS3 322 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 MARS2Q96GW9 593 aaKnown RBP12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 MICU1Q9BPX6 476 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 HDHD3Q9BSH5 251 aaPredicted RBP12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 RTL8AQ9BWD3 113 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 OR51B6Q9H340 312 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF701Q9NV72 531 aaPredicted RBP12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 EHFQ9NZC4 300 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 OPN4Q9UHM6 478 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 HSPB11Q9Y547 144 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
RTFDC1-201ENST00000023939 IGKV1D-8A0A087WSZ0 117 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 C9orf170A2RU37 121 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 LRP5LA4QPB2 252 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 F5H5P2 479 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 J3QT63 122 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 HLA-AP01891 365 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 CECR9P0C854 216 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 CA6P23280 308 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 H2BFSP57053 126 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 PPP1R1AQ13522 171 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 HAGHLQ6PII5 290 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms