RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TOMM20LQ6UXN7 152 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 DLEU7Q6UYE1 221 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 DUSP18Q8NEJ0 188 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 Q96M85 177 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 TNFRSF13CQ96RJ3 184 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SIT1Q9Y3P8 196 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 C18orf21Q32NC0 220 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PTGESO14684 152 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 HIST1H1CP16403 213 aaKnown RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 LSM11P83369 360 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PMS2P11Q13670 270 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SLC16A12Q6ZSM3 486 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 WDR31Q8NA23 367 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 NOXO1Q8NFA2 376 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 OR2A5Q96R48 311 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 AKIP1Q9NQ31 210 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 OR5AC2Q9NZP5 309 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PIPOXQ9P0Z9 390 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 CLN8Q9UBY8 286 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 HIVEP3Q5T1R4 2406 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PLPP1O14494 284 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 GPR37O15354 613 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SLC25A4P12235 298 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 NTHL1P78549 312 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 RGS7BPQ6MZT1 257 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PAQR6Q6TCH4 344 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 C6orf201Q7Z4U5 140 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SLC7A5P1Q8MH63 180 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 CADM4Q8NFZ8 388 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PLA2G12AQ9BZM1 189 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 TWSG1Q9GZX9 223 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PARP11Q9NR21 331 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 COL18A1P39060 1754 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 A0A1W2PS18 150 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A26D6RGX4 464 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 NME2P1O60361 137 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 C1SP09871 688 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 GZMHP20718 246 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 DLX1P56177 255 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 RPS16P62249 146 aaKnown RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 HTRA3P83110 453 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 GSG1Q2KHT4 349 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM182Q6ZP80 229 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 OR52I2Q8NH67 350 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 RXFP4Q8TDU9 374 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 OR2V2Q96R30 315 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PBOV1Q9GZY1 135 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SLC22A13Q9Y226 551 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SIP14410 1827 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 LMO7DNF2Z398 122 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 NUPL2O15504 423 aaKnown RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PRR27Q6MZM9 219 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 PNPLA1Q8N8W4 532 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 ZFP62Q8NB50 900 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM45BQ96B21 275 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 SORBS1Q9BX66 1292 aaKnown RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 AJAP1Q9UKB5 411 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-201ENST00000011700 ADAMTS9Q9P2N4 1935 aa5.46□□□□□ -1.54
VPS13D-201ENST00000011700 TRAV17A0A0B4J275 112 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 NPIPB6E9PJ23 425 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 GPNMBQ14956 572 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 BEX5Q5H9J7 111 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 MRM1Q6IN84 353 aaKnown RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 A0A087X0M5 115 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 A0A1B0GX30 115 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TCL1AP56279 114 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PRTGQ2VWP7 1150 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 MS4A6EQ96DS6 147 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 CDX2Q99626 313 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF552Q9H707 407 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PISDQ9UG56 409 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ANKHD1Q8IWZ3 2542 aaKnown RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 IGF2P01344 180 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OPN1LWP04000 364 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 EXOSC7Q15024 291 aaKnown RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 SYPL1Q16563 259 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 MRGPREQ86SM8 312 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 FADS6Q8N9I5 356 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 NUBPLQ8TB37 319 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 NAA60Q9H7X0 242 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 A0A087WUJ7 227 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 DNAL4O96015 105 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 DCTDP32321 178 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ELLP55199 621 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF761Q86XN6 746 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TMED6Q8WW62 240 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PCDH15Q96QU1 1955 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 RER1O15258 196 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF737O75373 536 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 SEC11BP0C7V7 166 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 NQO2P16083 231 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 CDC34P49427 236 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PSMB2P49721 201 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PRSS54Q6PEW0 395 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 RBPMS2Q6ZRY4 209 aaKnown RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 AP5S1Q9NUS5 200 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TCFL5Q9UL49 500 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 RCL1Q9Y2P8 373 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms