RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HEXAP06865 529 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 CTSDP07339 412 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-233ENST00000642021 OR5H8P0DN80 308 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 IGFBP4P22692 258 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 AKIRIN2Q53H80 203 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 CDCP2Q5VXM1 449 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 AKR1E2Q96JD6 320 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 SULT4A1Q9BR01 284 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 PPP1R14DQ9NXH3 145 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 COA4Q9NYJ1 87 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 TUBD1Q9UJT1 453 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 PADI1Q9ULC6 663 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 TOX3O15405 576 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-233ENST00000642021 DHHO43323 396 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 MTCP1P56278 107 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 HIST1H3AP68431 136 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 HGFACQ04756 655 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 HIST2H3PS2Q5TEC6 136 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 TSPO2Q5TGU0 170 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 EIF5AL1Q6IS14 154 aaKnown RBP12.05□□□□□ -0.48
PHGDH-233ENST00000642021 HIST2H3AQ71DI3 136 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 ZIC4Q8N9L1 334 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 SECTM1Q8WVN6 248 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 TOMM40LQ969M1 308 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 MARS2Q96GW9 593 aaKnown RBP12.05□□□□□ -0.48
PHGDH-233ENST00000642021 DECR2Q9NUI1 292 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 AK3Q9UIJ7 227 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 LY6G6EA0A0G2JKS1 128 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 RRP8O43159 456 aaKnown RBP12.05□□□□□ -0.48
PHGDH-233ENST00000642021 F2RL1P55085 397 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 PIGPP57054 158 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 PEA15Q15121 130 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 AVPI1Q5T686 147 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 Q6ZSR3 168 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 NAXEQ8NCW5 288 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 DMBX1Q8NFW5 382 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 KIRREL1Q96J84 757 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 PARP11Q9NR21 331 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 OCIAD1Q9NX40 245 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 U3KQA8 63 aa12.05□□□□□ -0.48
PHGDH-233ENST00000642021 FAM230AA0A1W2PPH8 454 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 FAM221AA4D161 298 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-233ENST00000642021 CCL3P10147 92 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 EIF5AP63241 154 aaKnown RBP12.04□□□□□ -0.48
PHGDH-233ENST00000642021 PROK2Q9HC23 129 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 FSCN3Q9NQT6 498 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 MASP2O00187 686 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 ZIC3O60481 467 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 CA11O75493 328 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 JTBO76095 146 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 NTF4P34130 210 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 FHITP49789 147 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 FAM76BQ5HYJ3 339 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 MRPL14Q6P1L8 145 aaKnown RBP12.04□□□□□ -0.48
PHGDH-233ENST00000642021 FOXL2NBQ6ZUU3 175 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 LYZL2Q7Z4W2 148 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 OR9K2Q8NGE7 335 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 PHF7Q9BWX1 381 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-233ENST00000642021 WFDC1Q9HC57 220 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 BIN3Q9NQY0 253 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 CACFD1Q9UGQ2 172 aa12.04□□□□□ -0.48
PHGDH-233ENST00000642021 NXT1Q9UKK6 140 aaKnown RBP12.04□□□□□ -0.48
PHGDH-233ENST00000642021 NPIPA2E9PIF3 369 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 NPIPA3F8WFD2 350 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 DIRAS3O95661 229 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 PATE4P0C8F1 98 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 EIF3IQ13347 325 aaKnown RBP12.03□□□□□ -0.48
PHGDH-233ENST00000642021 PCOLCEQ15113 449 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 PDCD1Q15116 288 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 RAET1LQ5VY80 246 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 LYPD6BQ8NI32 183 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 REEP6Q96HR9 211 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 JSRP1Q96MG2 331 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-233ENST00000642021 CLCC1Q96S66 551 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-233ENST00000642021 SHANK1Q9Y566 2161 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 ZNF850A8MQ14 1090 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 XRCC2O43543 280 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 GAPDHP04406 335 aaKnown RBP12.03□□□□□ -0.48
PHGDH-233ENST00000642021 ZNF133P52736 654 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-233ENST00000642021 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-233ENST00000642021 CACNA1EQ15878 2313 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 PPP1R3BQ86XI6 285 aa12.03□□□□□ -0.48
PHGDH-233ENST00000642021 A0A0J9YW62 118 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 TP53I11O14683 189 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 IFNA21P01568 189 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 FABP1P07148 127 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 PCP4P48539 62 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 PPT1P50897 306 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 FXYD4P59646 89 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 FAM3AP98173 230 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 TMEM187Q14656 261 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 ARL6IP1Q15041 203 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 PPA1Q15181 289 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms