RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 DUX4L2P0CJ85 424 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DUX4L3P0CJ86 424 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DUX4L4P0CJ87 422 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DUX4L5P0CJ88 424 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DUX4L6P0CJ89 424 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DUX4L7P0CJ90 424 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 HKR1P10072 659 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 CCL2P13500 99 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 CARD18P57730 90 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 MRPS34P82930 218 aaKnown RBP14.61□□□□□ -0.07
PHGDH-223ENST00000641597 ZNF92Q03936 586 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 EXT1Q16394 746 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 FBXL14Q8N1E6 418 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 NAA11Q9BSU3 229 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-223ENST00000641597 TREM1Q9NP99 234 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DUX4Q9UBX2 424 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 ANXA10Q9UJ72 324 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 C14orf166Q9Y224 244 aaKnown RBP14.61□□□□□ -0.07
PHGDH-223ENST00000641597 SPENQ96T58 3664 aaKnown RBP14.61□□□□□ -0.07
PHGDH-223ENST00000641597 MED19A0JLT2 244 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-223ENST00000641597 ZNF850A8MQ14 1090 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 F8W036 122 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 CBR3O75828 277 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 DIRAS3O95661 229 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 CBX5P45973 191 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 BLOC1S1P78537 153 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 CEACAM16Q2WEN9 425 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 TCEAL6Q6IPX3 200 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 TMEM105Q8N8V8 129 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 OR10AD1Q8NGE0 317 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 OR1F12Q8NHA8 337 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 RNF141Q8WVD5 230 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 TCEAL3Q969E4 200 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.61□□□□□ -0.07
PHGDH-223ENST00000641597 TMEM38BQ9NVV0 291 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 CRIM1Q9NZV1 1036 aa14.61□□□□□ -0.07
PHGDH-223ENST00000641597 ZNF716A6NP11 495 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 C9JQL5 133 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 XRCC2O43543 280 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 TSPAN9O75954 239 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 VAMP5O95183 116 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 NFYBP25208 207 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 NPBWR1P48145 328 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 ZNF133P52736 654 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-223ENST00000641597 PIGPP57054 158 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 GGNBP1Q5YKI7 109 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 AQP10Q96PS8 301 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 P4HTMQ9NXG6 502 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 PADI1Q9ULC6 663 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 TNRC6BQ9UPQ9 1833 aaKnown RBP14.6□□□□□ -0.07
PHGDH-223ENST00000641597 LRRC3CA6NJW4 275 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 FARS2O95363 451 aaKnown RBP14.6□□□□□ -0.07
PHGDH-223ENST00000641597 MUC1P15941 1255 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-223ENST00000641597 RBMXP38159 391 aaKnown RBP14.6□□□□□ -0.07
PHGDH-223ENST00000641597 FOLR3P41439 243 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 AAED1Q7RTV5 226 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 CALHM1Q8IU99 346 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 SKA3Q8IX90 412 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 OR10D3Q8NH80 312 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 RHBDD1Q8TEB9 315 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 ERGIC1Q969X5 290 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 ZFHX4Q86UP3 3567 aa14.6□□□□□ -0.07
PHGDH-223ENST00000641597 NTN3O00634 580 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-223ENST00000641597 ZFP36L1Q07352 338 aaKnown RBP14.59□□□□□ -0.07
PHGDH-223ENST00000641597 TRIM61Q5EBN2 209 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 FAM122CQ6P4D5 195 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 PPP1R32Q7Z5V6 425 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 CLRN3Q8NCR9 226 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 OR5L1Q8NGL2 311 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 M1APQ8TC57 530 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 HS3ST6Q96QI5 342 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 CMSS1Q9BQ75 279 aaKnown RBP14.59□□□□□ -0.07
PHGDH-223ENST00000641597 GHRLQ9UBU3 117 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 LPAR3Q9UBY5 353 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 FCGR3AP08637 254 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 OR5AC1P0C628 307 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 LYL1P12980 280 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 NPBWR2P48146 333 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 ASCL1P50553 236 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 FOXG1P55316 489 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-223ENST00000641597 SRYQ05066 204 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 SPINK14Q6IE38 97 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 H3F3CQ6NXT2 135 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 ETV3LQ6ZN32 361 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 LYZL2Q7Z4W2 148 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 ESX1Q8N693 406 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 PIGCQ92535 297 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 TAF9BQ9HBM6 251 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 ZNF629Q9UEG4 869 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-223ENST00000641597 MED13Q9UHV7 2174 aa14.59□□□□□ -0.07
PHGDH-223ENST00000641597 MED6O75586 246 aa14.58□□□□□ -0.08
PHGDH-223ENST00000641597 CELA3AP09093 270 aa14.58□□□□□ -0.08
PHGDH-223ENST00000641597 FKBP2P26885 142 aaKnown RBP14.58□□□□□ -0.08
PHGDH-223ENST00000641597 RAC3P60763 192 aa14.58□□□□□ -0.08
PHGDH-223ENST00000641597 DAZAP2Q15038 168 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-223ENST00000641597 RAB35Q15286 201 aa14.58□□□□□ -0.08
PHGDH-223ENST00000641597 CPEB3Q8NE35 698 aaKnown RBP14.58□□□□□ -0.08
PHGDH-223ENST00000641597 ARL11Q969Q4 196 aa14.58□□□□□ -0.08
PHGDH-223ENST00000641597 CNTNAP3BQ96NU0 1288 aa14.58□□□□□ -0.08
PHGDH-223ENST00000641597 SCGB3A2Q96PL1 93 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms